Literature DB >> 15624147

Novel electrophoresis mechanism based on synchronous alternating drag perturbation.

Andre Marziali1, Joel Pel, Dan Bizzotto, Lorne A Whitehead.   

Abstract

We present a novel means of transporting molecules in solution by applying a zero-time-average alternating motive force to the molecules, and perturbing the molecular drag coefficient synchronously with the applied force, thus causing a net drift in a direction determined by the phase of the alternating drag perturbation relative to the alternating force. We apply an electrophoretic form of the method to transport and concentrate DNA in a gel, such that all molecules migrate on average away from the nearest electrode and toward a central region. Since an electrode does not occupy this central region, this method presents the possibility of transporting and focusing DNA and other charged molecules in regions free from electrodes and the associated electrochemistry.

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Year:  2005        PMID: 15624147     DOI: 10.1002/elps.200406140

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  9 in total

1.  An instrument for automated purification of nucleic acids from contaminated forensic samples.

Authors:  David J Broemeling; Joel Pel; Dylan C Gunn; Laura Mai; Jason D Thompson; Hiron Poon; Andre Marziali
Journal:  JALA Charlottesv Va       Date:  2008-02

2.  Nonlinear electrophoretic response yields a unique parameter for separation of biomolecules.

Authors:  Joel Pel; David Broemeling; Laura Mai; Hau-Ling Poon; Giorgia Tropini; René L Warren; Robert A Holt; Andre Marziali
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-17       Impact factor: 11.205

Review 3.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

Authors:  Kevin D Dorfman; Scott B King; Daniel W Olson; Joel D P Thomas; Douglas R Tree
Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

4.  Effective removal of co-purified inhibitors from extracted DNA samples using synchronous coefficient of drag alteration (SCODA) technology.

Authors:  Sarah Schmedes; Pamela Marshall; Jonathan L King; Bruce Budowle
Journal:  Int J Legal Med       Date:  2012-12-20       Impact factor: 2.686

5.  Somatic mutation detection using various targeted detection assays in paired samples of circulating tumor DNA, primary tumor and metastases from patients undergoing resection of colorectal liver metastases.

Authors:  Nick Beije; Jean C Helmijr; Marjolein J A Weerts; Corine M Beaufort; Matthew Wiggin; Andre Marziali; Cornelis Verhoef; Stefan Sleijfer; Maurice P H M Jansen; John W M Martens
Journal:  Mol Oncol       Date:  2016-12       Impact factor: 6.603

Review 6.  Liquid biopsies come of age: towards implementation of circulating tumour DNA.

Authors:  Jonathan C M Wan; Charles Massie; Javier Garcia-Corbacho; Florent Mouliere; James D Brenton; Carlos Caldas; Simon Pacey; Richard Baird; Nitzan Rosenfeld
Journal:  Nat Rev Cancer       Date:  2017-02-24       Impact factor: 60.716

7.  Winnowing DNA for rare sequences: highly specific sequence and methylation based enrichment.

Authors:  Jason D Thompson; Gosuke Shibahara; Sweta Rajan; Joel Pel; Andre Marziali
Journal:  PLoS One       Date:  2012-02-15       Impact factor: 3.240

Review 8.  Circulating Cell-Free Tumour DNA in the Management of Cancer.

Authors:  Glenn Francis; Sandra Stein
Journal:  Int J Mol Sci       Date:  2015-06-19       Impact factor: 5.923

9.  Exploiting biased reptation for continuous flow preparative DNA fractionation in a versatile microfluidic platform.

Authors:  Burcu Gumuscu; Johan G Bomer; Hans L de Boer; Albert van den Berg; Jan C T Eijkel
Journal:  Microsyst Nanoeng       Date:  2017-05-22       Impact factor: 7.127

  9 in total

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