Literature DB >> 15617377

Colorimetric biosensors based on DNAzyme-assembled gold nanoparticles.

Juewen Liu1, Yi Lu.   

Abstract

Taking advantage of recent developments in the field of metallic nanoparticle-based colorimetric DNA detection and in the field of in vitro selection of functional DNA/RNA that can recognize a wide range of analytes, we have designed highly sensitive and selective colorimetric biosensors for many analytes of choice. As an example of the sensor design strategy, a highly sensitive and selective colorimetric lead biosensor based on DNAzyme-directed assembly of gold nanoparticles is reviewed. The DNAzyme consists of an enzyme and a substrate strand, which can be used to assemble DNA-functionalized gold nanoparticles. The aggregation brings gold nanoparticles together, resulting in a blue-colored nanoparticle assembly. In the presence of lead, the DNAzyme catalyzes specific hydrolytic cleavage of the substrate strand, which disrupts the formation of the nanoparticle assembly, resulting in red-colored individual nanoparticles. The application of the sensor in lead detection in leaded paint is also demonstrated. In perspective, the use of allosteric DNA/RNAzymes to expand the range of the nanoparticle-based sensor design method is described.

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Year:  2004        PMID: 15617377     DOI: 10.1023/b:jofl.0000031816.06134.d3

Source DB:  PubMed          Journal:  J Fluoresc        ISSN: 1053-0509            Impact factor:   2.217


  115 in total

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Journal:  Curr Opin Struct Biol       Date:  2000-06       Impact factor: 6.809

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Journal:  Chem Rev       Date:  1997-04-01       Impact factor: 60.622

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Journal:  Biosens Bioelectron       Date:  1999-05-31       Impact factor: 10.618

4.  Fluorescent Sensors Based on Aptamer Self-Assembly.

Authors:  Milan N Stojanovic; Paloma de Prada; Donald W Landry
Journal:  J Am Chem Soc       Date:  2000-11-22       Impact factor: 15.419

5.  Capping DNA with DNA.

Authors:  Y Li; Y Liu; R R Breaker
Journal:  Biochemistry       Date:  2000-03-21       Impact factor: 3.162

6.  A DNA enzyme with Mg(2+)-dependent RNA phosphoesterase activity.

Authors:  R R Breaker; G F Joyce
Journal:  Chem Biol       Date:  1995-10

7.  Molecular recognition of cAMP by an RNA aptamer.

Authors:  M Koizumi; R R Breaker
Journal:  Biochemistry       Date:  2000-08-01       Impact factor: 3.162

8.  In vitro selection and characterization of streptomycin-binding RNAs: recognition discrimination between antibiotics.

Authors:  S T Wallace; R Schroeder
Journal:  RNA       Date:  1998-01       Impact factor: 4.942

9.  Potent 2'-amino-2'-deoxypyrimidine RNA inhibitors of basic fibroblast growth factor.

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Journal:  Biochemistry       Date:  1995-09-12       Impact factor: 3.162

10.  A DNA metalloenzyme with DNA ligase activity.

Authors:  B Cuenoud; J W Szostak
Journal:  Nature       Date:  1995-06-15       Impact factor: 49.962

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  22 in total

Review 1.  Plasmon light scattering in biology and medicine: new sensing approaches, visions and perspectives.

Authors:  Kadir Aslan; Joseph R Lakowicz; Chris D Geddes
Journal:  Curr Opin Chem Biol       Date:  2005-10       Impact factor: 8.822

Review 2.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

Review 3.  Metal-Dependent DNAzymes for the Quantitative Detection of Metal Ions in Living Cells: Recent Progress, Current Challenges, and Latest Results on FRET Ratiometric Sensors.

Authors:  Kevin Hwang; Quanbing Mou; Ryan J Lake; Mengyi Xiong; Brandalynn Holland; Yi Lu
Journal:  Inorg Chem       Date:  2019-07-31       Impact factor: 5.165

4.  DNAzyme catalytic beacon sensors that resist temperature-dependent variations.

Authors:  Nandini Nagraj; Juewen Liu; Stephanie Sterling; Jenny Wu; Yi Lu
Journal:  Chem Commun (Camb)       Date:  2009-06-03       Impact factor: 6.222

5.  A Phenylamine-Oligothiophene-Based Fluorescent Chemosensor for Selective Detection of Hg(II).

Authors:  Qingfen Niu; Xingxing Wu; Tianduo Li; Yuezhi Cui; Shanshan Zhang; Qiuchen Su
Journal:  J Fluoresc       Date:  2016-04-07       Impact factor: 2.217

Review 6.  DNA as sensors and imaging agents for metal ions.

Authors:  Yu Xiang; Yi Lu
Journal:  Inorg Chem       Date:  2013-12-20       Impact factor: 5.165

7.  In vitro selection of high temperature Zn(2+)-dependent DNAzymes.

Authors:  Kevin E Nelson; Peter J Bruesehoff; Yi Lu
Journal:  J Mol Evol       Date:  2005-08-04       Impact factor: 2.395

8.  N-benzoate-N' salicylaldehyde ethynelediamine: a new fluorescent sensor for Zn2+ ion by "off-on" mode.

Authors:  Diganta Kumar Das; Priyanka Goswami; Barnita Medhi
Journal:  J Fluoresc       Date:  2013-12-06       Impact factor: 2.217

9.  Label-free fluorescent aptamer sensor based on regulation of malachite green fluorescence.

Authors:  Weichen Xu; Yi Lu
Journal:  Anal Chem       Date:  2010-01-15       Impact factor: 6.986

10.  Protein corona composition does not accurately predict hematocompatibility of colloidal gold nanoparticles.

Authors:  Marina A Dobrovolskaia; Barry W Neun; Sonny Man; Xiaoying Ye; Matthew Hansen; Anil K Patri; Rachael M Crist; Scott E McNeil
Journal:  Nanomedicine       Date:  2014-02-07       Impact factor: 5.307

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