Literature DB >> 15612674

DNA-templated assembly of helical cyanine dye aggregates: a supramolecular chain polymerization.

Kristen C Hannah1, Bruce A Armitage.   

Abstract

Symmetrical cationic cyanine dyes assemble in cooperative fashion into helical supramolecular polymers using DNA as a template. The dyes assemble into cofacial dimers within the minor groove of the DNA and assembly of one dimer facilitates assembly of additional dimers directly adjacent to the first. Growth of the polymer ceases when the end of the DNA is reached or when the DNA sequence blocks dimerization of the dye. Thus, this process can be thought of as a supramolecular analogue of a chain polymerization. This Account describes how polymerization depends on the dye structure and DNA sequence and also summarizes the interesting optical properties exhibited by these chiral, helical materials.

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Year:  2004        PMID: 15612674     DOI: 10.1021/ar030257c

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  28 in total

1.  Single-stranded nucleic acid-induced helical self-assembly of alkynylplatinum(II) terpyridyl complexes.

Authors:  Cong Yu; Kenneth Hoi-Yiu Chan; Keith Man-Chung Wong; Vivian Wing-Wah Yam
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-18       Impact factor: 11.205

2.  Fluorescent DNA nanotags: supramolecular fluorescent labels based on intercalating dye arrays assembled on nanostructured DNA templates.

Authors:  Andrea L Benvin; Yehuda Creeger; Gregory W Fisher; Byron Ballou; Alan S Waggoner; Bruce A Armitage
Journal:  J Am Chem Soc       Date:  2007-01-26       Impact factor: 15.419

3.  Inhibition of high-mobility-group A2 protein binding to DNA by netropsin: a biosensor-surface plasmon resonance assay.

Authors:  Yi Miao; Tengjiao Cui; Fenfei Leng; W David Wilson
Journal:  Anal Biochem       Date:  2007-10-23       Impact factor: 3.365

4.  Programmed coherent coupling in a synthetic DNA-based excitonic circuit.

Authors:  Étienne Boulais; Nicolas P D Sawaya; Rémi Veneziano; Alessio Andreoni; James L Banal; Toru Kondo; Sarthak Mandal; Su Lin; Gabriela S Schlau-Cohen; Neal W Woodbury; Hao Yan; Alán Aspuru-Guzik; Mark Bathe
Journal:  Nat Mater       Date:  2017-11-13       Impact factor: 43.841

5.  DNA/RNA Fluorescence Imaging by Synthetic Nucleic Acids.

Authors:  Akimitsu Okamoto
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 6.  DNA-multichromophore systems.

Authors:  Yin Nah Teo; Eric T Kool
Journal:  Chem Rev       Date:  2012-03-16       Impact factor: 60.622

7.  Linker dependent intercalation of bisbenzimidazole-aminosugars in an RNA duplex; selectivity in RNA vs. DNA binding.

Authors:  Nihar Ranjan; Dev P Arya
Journal:  Bioorg Med Chem Lett       Date:  2016-10-27       Impact factor: 2.823

8.  Coherent Exciton Delocalization in a Two-State DNA-Templated Dye Aggregate System.

Authors:  Brittany L Cannon; Donald L Kellis; Lance K Patten; Paul H Davis; Jeunghoon Lee; Elton Graugnard; Bernard Yurke; William B Knowlton
Journal:  J Phys Chem A       Date:  2017-09-06       Impact factor: 2.781

9.  Influence of DNA structure on adjacent site cooperative binding.

Authors:  Maryam Rahimian; Yi Miao; W David Wilson
Journal:  J Phys Chem B       Date:  2008-06-27       Impact factor: 2.991

10.  Membrane potential and pH-dependent accumulation of decynium-22 (1,1'-diethyl-2,2'-cyanine iodide) flourencence through OCT transporters in astrocytes.

Authors:  Mikhail Inyushin; Yuri Kucheryaykh; Lilia Kucheryavykh; Priscilla Sanabria; Carlos Jiménez-Rivera; Irina Struganova; Misty Eaton; Serguei Skatchkov
Journal:  Bol Asoc Med P R       Date:  2010 Jul-Sep
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