Literature DB >> 29180771

Programmed coherent coupling in a synthetic DNA-based excitonic circuit.

Étienne Boulais1,2, Nicolas P D Sawaya2,3, Rémi Veneziano1, Alessio Andreoni4, James L Banal1,2, Toru Kondo2,5, Sarthak Mandal4, Su Lin4,6, Gabriela S Schlau-Cohen2,5, Neal W Woodbury4,6, Hao Yan6,7, Alán Aspuru-Guzik2,3, Mark Bathe1,2.   

Abstract

Natural light-harvesting systems spatially organize densely packed chromophore aggregates using rigid protein scaffolds to achieve highly efficient, directed energy transfer. Here, we report a synthetic strategy using rigid DNA scaffolds to similarly program the spatial organization of densely packed, discrete clusters of cyanine dye aggregates with tunable absorption spectra and strongly coupled exciton dynamics present in natural light-harvesting systems. We first characterize the range of dye-aggregate sizes that can be templated spatially by A-tracts of B-form DNA while retaining coherent energy transfer. We then use structure-based modelling and quantum dynamics to guide the rational design of higher-order synthetic circuits consisting of multiple discrete dye aggregates within a DX-tile. These programmed circuits exhibit excitonic transport properties with prominent circular dichroism, superradiance, and fast delocalized exciton transfer, consistent with our quantum dynamics predictions. This bottom-up strategy offers a versatile approach to the rational design of strongly coupled excitonic circuits using spatially organized dye aggregates for use in coherent nanoscale energy transport, artificial light-harvesting, and nanophotonics.

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Year:  2017        PMID: 29180771     DOI: 10.1038/nmat5033

Source DB:  PubMed          Journal:  Nat Mater        ISSN: 1476-1122            Impact factor:   43.841


  44 in total

1.  Enhanced energy transport in genetically engineered excitonic networks.

Authors:  Heechul Park; Nimrod Heldman; Patrick Rebentrost; Luigi Abbondanza; Alessandro Iagatti; Andrea Alessi; Barbara Patrizi; Mario Salvalaggio; Laura Bussotti; Masoud Mohseni; Filippo Caruso; Hannah C Johnsen; Roberto Fusco; Paolo Foggi; Petra F Scudo; Seth Lloyd; Angela M Belcher
Journal:  Nat Mater       Date:  2015-10-12       Impact factor: 43.841

2.  DNA-templated assembly of helical cyanine dye aggregates: a supramolecular chain polymerization.

Authors:  Kristen C Hannah; Bruce A Armitage
Journal:  Acc Chem Res       Date:  2004-11       Impact factor: 22.384

3.  Folding DNA to create nanoscale shapes and patterns.

Authors:  Paul W K Rothemund
Journal:  Nature       Date:  2006-03-16       Impact factor: 49.962

4.  Lattice engineering through nanoparticle-DNA frameworks.

Authors:  Ye Tian; Yugang Zhang; Tong Wang; Huolin L Xin; Huilin Li; Oleg Gang
Journal:  Nat Mater       Date:  2016-02-22       Impact factor: 43.841

Review 5.  Nanomaterials. Programmable materials and the nature of the DNA bond.

Authors:  Matthew R Jones; Nadrian C Seeman; Chad A Mirkin
Journal:  Science       Date:  2015-02-20       Impact factor: 47.728

6.  DNA gridiron nanostructures based on four-arm junctions.

Authors:  Dongran Han; Suchetan Pal; Yang Yang; Shuoxing Jiang; Jeanette Nangreave; Yan Liu; Hao Yan
Journal:  Science       Date:  2013-03-22       Impact factor: 47.728

7.  Plasmon-Exciton Coupling Using DNA Templates.

Authors:  Eva-Maria Roller; Christos Argyropoulos; Alexander Högele; Tim Liedl; Mauricio Pilo-Pais
Journal:  Nano Lett       Date:  2016-08-22       Impact factor: 11.189

Review 8.  Functional supramolecular polymers.

Authors:  T Aida; E W Meijer; S I Stupp
Journal:  Science       Date:  2012-02-17       Impact factor: 47.728

9.  Optical studies on complexes between DNA and pseudoisocyanine.

Authors:  B Nordén
Journal:  Biophys Chem       Date:  1976-12       Impact factor: 2.352

10.  Assembling programmable FRET-based photonic networks using designer DNA scaffolds.

Authors:  Susan Buckhout-White; Christopher M Spillmann; W Russ Algar; Ani Khachatrian; Joseph S Melinger; Ellen R Goldman; Mario G Ancona; Igor L Medintz
Journal:  Nat Commun       Date:  2014-12-11       Impact factor: 14.919

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  18 in total

Review 1.  Modulation of Aggregation-Induced Emission by Excitation Energy Transfer: Design and Application.

Authors:  Lei Dong; Hui-Qing Peng; Li-Ya Niu; Qing-Zheng Yang
Journal:  Top Curr Chem (Cham)       Date:  2021-04-07

2.  Computational investigation of the impact of core sequence on immobile DNA four-way junction structure and dynamics.

Authors:  Matthew R Adendorff; Guo Qing Tang; David P Millar; Mark Bathe; William P Bricker
Journal:  Nucleic Acids Res       Date:  2022-01-25       Impact factor: 16.971

3.  Understanding Self-Assembled Pseudoisocyanine Dye Aggregates in DNA Nanostructures and Their Exciton Relay Transfer Capabilities.

Authors:  Matthew Chiriboga; Sebastian A Diaz; Divita Mathur; David A Hastman; Joseph S Melinger; Remi Veneziano; Igor L Medintz
Journal:  J Phys Chem B       Date:  2021-12-28       Impact factor: 2.991

4.  Rotaxane rings promote oblique packing and extended lifetimes in DNA-templated molecular dye aggregates.

Authors:  Matthew S Barclay; Simon K Roy; Jonathan S Huff; Olga A Mass; Daniel B Turner; Christopher K Wilson; Donald L Kellis; Ewald A Terpetschnig; Jeunghoon Lee; Paul H Davis; Bernard Yurke; William B Knowlton; Ryan D Pensack
Journal:  Commun Chem       Date:  2021-02-18

5.  Automated Sequence Design of 3D Polyhedral Wireframe DNA Origami with Honeycomb Edges.

Authors:  Hyungmin Jun; Tyson R Shepherd; Kaiming Zhang; William P Bricker; Shanshan Li; Wah Chiu; Mark Bathe
Journal:  ACS Nano       Date:  2019-01-24       Impact factor: 15.881

6.  Molecular model of J-aggregated pseudoisocyanine fibers.

Authors:  William P Bricker; James L Banal; Matthew B Stone; Mark Bathe
Journal:  J Chem Phys       Date:  2018-07-14       Impact factor: 3.488

7.  Enhancing Long-Range Energy Transport in Supramolecular Architectures by Tailoring Coherence Properties.

Authors:  Bernd Wittmann; Felix A Wenzel; Stephan Wiesneth; Andreas T Haedler; Markus Drechsler; Klaus Kreger; Jürgen Köhler; E W Meijer; Hans-Werner Schmidt; Richard Hildner
Journal:  J Am Chem Soc       Date:  2020-04-27       Impact factor: 15.419

8.  Bioproduction of pure, kilobase-scale single-stranded DNA.

Authors:  Tyson R Shepherd; Rebecca R Du; Hellen Huang; Eike-Christian Wamhoff; Mark Bathe
Journal:  Sci Rep       Date:  2019-04-16       Impact factor: 4.379

9.  Supertransport of excitons in atomically thin organic semiconductors at the 2D quantum limit.

Authors:  Ankur Sharma; Linglong Zhang; Jonathan O Tollerud; Miheng Dong; Yi Zhu; Robert Halbich; Tobias Vogl; Kun Liang; Hieu T Nguyen; Fan Wang; Shilpa Sanwlani; Stuart K Earl; Daniel Macdonald; Ping Koy Lam; Jeffrey A Davis; Yuerui Lu
Journal:  Light Sci Appl       Date:  2020-07-06       Impact factor: 17.782

10.  Anisotropic energy transfer in crystalline chromophore assemblies.

Authors:  Ritesh Haldar; Marius Jakoby; Antoine Mazel; Qiang Zhang; Alexander Welle; Tawheed Mohamed; Peter Krolla; Wolfgang Wenzel; Stéphane Diring; Fabrice Odobel; Bryce S Richards; Ian A Howard; Christof Wöll
Journal:  Nat Commun       Date:  2018-10-18       Impact factor: 14.919

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