Literature DB >> 15607969

Towards a splicing code.

Xiang-Dong Fu1.   

Abstract

A combination of experimental and bioinformatics approaches leads Burge and colleagues (Wang et al., 2004 [this issue of Cell]) to a global view of how an RNA segment may be selected or avoided in mature mRNAs due to biased distributions of exonic enhancers and silencers, a process vital for genome evolution, developmental control, and disease onset.

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Year:  2004        PMID: 15607969     DOI: 10.1016/j.cell.2004.11.039

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  27 in total

Review 1.  Splicing regulation: from a parts list of regulatory elements to an integrated splicing code.

Authors:  Zefeng Wang; Christopher B Burge
Journal:  RNA       Date:  2008-03-27       Impact factor: 4.942

Review 2.  Context-dependent control of alternative splicing by RNA-binding proteins.

Authors:  Xiang-Dong Fu; Manuel Ares
Journal:  Nat Rev Genet       Date:  2014-08-12       Impact factor: 53.242

3.  HnRNP L represses exon splicing via a regulated exonic splicing silencer.

Authors:  Caryn R Rothrock; Amy E House; Kristen W Lynch
Journal:  EMBO J       Date:  2005-07-07       Impact factor: 11.598

Review 4.  Alternative splicing as a regulator of development and tissue identity.

Authors:  Francisco E Baralle; Jimena Giudice
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-10       Impact factor: 94.444

Review 5.  Expansion of the eukaryotic proteome by alternative splicing.

Authors:  Timothy W Nilsen; Brenton R Graveley
Journal:  Nature       Date:  2010-01-28       Impact factor: 49.962

6.  A novel splicing mutation in the SLC9A3R1 gene in tumors from ovarian cancer patients.

Authors:  Erica Lorena Kreimann; Magdalena Ratajska; Alina Kuzniacka; Brenda Demacopulo; Maciej Stukan; Janusz Limon
Journal:  Oncol Lett       Date:  2015-10-12       Impact factor: 2.967

Review 7.  Intronic RNA: Ad'junk' mediator of post-transcriptional gene regulation.

Authors:  Christopher R Neil; William G Fairbrother
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-11-01       Impact factor: 4.490

8.  Functional coupling of RNAP II transcription to spliceosome assembly.

Authors:  Rita Das; Kobina Dufu; Ben Romney; Megan Feldt; Mark Elenko; Robin Reed
Journal:  Genes Dev       Date:  2006-05-01       Impact factor: 11.361

9.  The intronic splicing code: multiple factors involved in ATM pseudoexon definition.

Authors:  Ashish Dhir; Emanuele Buratti; Maria A van Santen; Reinhard Lührmann; Francisco E Baralle
Journal:  EMBO J       Date:  2010-01-21       Impact factor: 11.598

10.  Dynamic regulation of alternative splicing by silencers that modulate 5' splice site competition.

Authors:  Yang Yu; Patricia A Maroney; John A Denker; Xiang H-F Zhang; Olexandr Dybkov; Reinhard Lührmann; Eckhard Jankowsky; Lawrence A Chasin; Timothy W Nilsen
Journal:  Cell       Date:  2008-12-26       Impact factor: 41.582

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