Literature DB >> 15606161

Design of a five-coordinate heme protein maquette: a spectroscopic model of deoxymyoglobin.

Jinyou Zhuang1, Jennifer H Amoroso, Ryan Kinloch, John H Dawson, Michael J Baldwin, Brian R Gibney.   

Abstract

The substitution of 1-methyl-l-histidine for the histidine heme ligands in a de novo designed four-alpha-helix bundle scaffold results in conversion of a six-coordinate cytochrome maquette into a self-assembled five-coordinate mono-(1-methyl-histidine)-ligated heme as an initial maquette for the dioxygen carrier protein myoglobin. UV-vis, magnetic circular dichroism, and resonance Raman spectroscopies demonstrate the presence of five-coordinate mono-(1-methyl-histidine) ligated ferrous heme spectroscopically similar to deoxymyoglobin. Thermodynamic analysis of the ferric and ferrous heme dissociation constants indicates greater destabilization of the ferric state than the ferrous state. The ferrous heme protein reacts with carbon monoxide to form a (1-methyl-histidine)-Fe(II)(heme)-CO complex; however, reaction with dioxygen leads to autoxidation and ferric heme dissociation. These results indicate that negative protein design can be used to generate a five-coordinate heme within a maquette scaffold.

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Year:  2004        PMID: 15606161     DOI: 10.1021/ic048502r

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  12 in total

1.  A simple method to engineer a protein-derived redox cofactor for catalysis.

Authors:  Sooim Shin; Moonsung Choi; Heather R Williamson; Victor L Davidson
Journal:  Biochim Biophys Acta       Date:  2014-05-22

Review 2.  Protein design: toward functional metalloenzymes.

Authors:  Fangting Yu; Virginia M Cangelosi; Melissa L Zastrow; Matteo Tegoni; Jefferson S Plegaria; Alison G Tebo; Catherine S Mocny; Leela Ruckthong; Hira Qayyum; Vincent L Pecoraro
Journal:  Chem Rev       Date:  2014-03-24       Impact factor: 60.622

3.  Controlling and fine tuning the physical properties of two identical metal coordination sites in de novo designed three stranded coiled coil peptides.

Authors:  Olga Iranzo; Saumen Chakraborty; Lars Hemmingsen; Vincent L Pecoraro
Journal:  J Am Chem Soc       Date:  2010-12-16       Impact factor: 15.419

4.  Sculpting Metal-binding Environments in De Novo Designed Three-helix Bundles.

Authors:  Jefferson S Plegaria; Vincent L Pecoraro
Journal:  Isr J Chem       Date:  2015-01-15       Impact factor: 3.333

5.  Methylated Histidines Alter Tautomeric Preferences that Influence the Rates of Cu Nitrite Reductase Catalysis in Designed Peptides.

Authors:  Karl J Koebke; Fangting Yu; Casey Van Stappen; Tyler B J Pinter; Aniruddha Deb; James E Penner-Hahn; Vincent L Pecoraro
Journal:  J Am Chem Soc       Date:  2019-05-06       Impact factor: 15.419

6.  Functional and mechanistic analyses of biomimetic aminoacyl transfer reactions in de novo designed coiled coil peptides via rational active site engineering.

Authors:  Luke J Leman; Dana A Weinberger; Zheng-Zheng Huang; Keith M Wilcoxen; M Reza Ghadiri
Journal:  J Am Chem Soc       Date:  2007-02-16       Impact factor: 15.419

7.  Computational design and elaboration of a de novo heterotetrameric alpha-helical protein that selectively binds an emissive abiological (porphinato)zinc chromophore.

Authors:  H Christopher Fry; Andreas Lehmann; Jeffery G Saven; William F DeGrado; Michael J Therien
Journal:  J Am Chem Soc       Date:  2010-03-24       Impact factor: 15.419

Review 8.  Metallopeptide catalysts and artificial metalloenzymes containing unnatural amino acids.

Authors:  Jared C Lewis
Journal:  Curr Opin Chem Biol       Date:  2014-12-26       Impact factor: 8.822

9.  An efficient, step-economical strategy for the design of functional metalloproteins.

Authors:  Jonathan Rittle; Mackenzie J Field; Michael T Green; F Akif Tezcan
Journal:  Nat Chem       Date:  2019-02-18       Impact factor: 24.427

10.  Design and engineering of an O(2) transport protein.

Authors:  Ronald L Koder; J L Ross Anderson; Lee A Solomon; Konda S Reddy; Christopher C Moser; P Leslie Dutton
Journal:  Nature       Date:  2009-03-19       Impact factor: 49.962

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