Literature DB >> 15582399

Structural aspects of non-ribosomal peptide biosynthesis.

Gregory L Challis1, James H Naismith.   

Abstract

Small peptides have powerful biological activities ranging from antibiotic to immune suppression. These peptides are synthesized by non-ribosomal peptide synthetases (NRPS). Structural understanding of NRPS took a huge leap forward in 2002; this information has led to several detailed biochemical studies and further structural studies. NRPS are complex molecular machines composed of multiple modules and each module contains several autonomously folded catalytic domains. Structural studies have largely focused on individual domains, isolated from the context of the multienzyme. Biochemical studies have looked at individual domains, isolated whole modules and intact NRPS, and the combined data begin to allow us to visualize the process of peptide assembly by NRPS.

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Year:  2004        PMID: 15582399      PMCID: PMC3326538          DOI: 10.1016/j.sbi.2004.10.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  38 in total

1.  The structure of VibH represents nonribosomal peptide synthetase condensation, cyclization and epimerization domains.

Authors:  Thomas A Keating; C Gary Marshall; Christopher T Walsh; Amy E Keating
Journal:  Nat Struct Biol       Date:  2002-07

2.  Structural basis for the cyclization of the lipopeptide antibiotic surfactin by the thioesterase domain SrfTE.

Authors:  Steven D Bruner; Thomas Weber; Rahul M Kohli; Dirk Schwarzer; Mohamed A Marahiel; Christopher T Walsh; Milton T Stubbs
Journal:  Structure       Date:  2002-03       Impact factor: 5.006

3.  Substrate recognition and selection by the initiation module PheATE of gramicidin S synthetase.

Authors:  L Luo; M D Burkart; T Stachelhaus; C T Walsh
Journal:  J Am Chem Soc       Date:  2001-11-14       Impact factor: 15.419

4.  Reconstitution and characterization of the Vibrio cholerae vibriobactin synthetase from VibB, VibE, VibF, and VibH.

Authors:  T A Keating; C G Marshall; C T Walsh
Journal:  Biochemistry       Date:  2000-12-19       Impact factor: 3.162

5.  Yersiniabactin synthetase: a four-protein assembly line producing the nonribosomal peptide/polyketide hybrid siderophore of Yersinia pestis.

Authors:  Deborah Ann Miller; Lusong Luo; Nathan Hillson; Thomas A Keating; Christopher T Walsh
Journal:  Chem Biol       Date:  2002-03

6.  Mutational analysis of the C-domain in nonribosomal peptide synthesis.

Authors:  Veit Bergendahl; Uwe Linne; Mohamed A Marahiel
Journal:  Eur J Biochem       Date:  2002-01

7.  Catalytic mapping of the vibriobactin biosynthetic enzyme VibF.

Authors:  C Gary Marshall; Nathan J Hillson; Christopher T Walsh
Journal:  Biochemistry       Date:  2002-01-08       Impact factor: 3.162

8.  Crystal structure of DhbE, an archetype for aryl acid activating domains of modular nonribosomal peptide synthetases.

Authors:  Jurgen J May; Nadine Kessler; Mohamed A Marahiel; Milton T Stubbs
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-09       Impact factor: 11.205

9.  Exploitation of the selectivity-conferring code of nonribosomal peptide synthetases for the rational design of novel peptide antibiotics.

Authors:  Katrin Eppelmann; Torsten Stachelhaus; Mohamed A Marahiel
Journal:  Biochemistry       Date:  2002-07-30       Impact factor: 3.162

10.  Timing of epimerization and condensation reactions in nonribosomal peptide assembly lines: kinetic analysis of phenylalanine activating elongation modules of tyrocidine synthetase B.

Authors:  Lusong Luo; Rahul M Kohli; Megumi Onishi; Uwe Linne; Mohamed A Marahiel; Christopher T Walsh
Journal:  Biochemistry       Date:  2002-07-23       Impact factor: 3.162

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  29 in total

Review 1.  Spatial Organization of Metabolic Enzyme Complexes in Cells.

Authors:  Danielle L Schmitt; Songon An
Journal:  Biochemistry       Date:  2017-06-16       Impact factor: 3.162

2.  Polyketide and nonribosomal peptide retro-biosynthesis and global gene cluster matching.

Authors:  Chris A Dejong; Gregory M Chen; Haoxin Li; Chad W Johnston; Mclean R Edwards; Philip N Rees; Michael A Skinnider; Andrew L H Webster; Nathan A Magarvey
Journal:  Nat Chem Biol       Date:  2016-10-03       Impact factor: 15.040

Review 3.  Explorations of catalytic domains in non-ribosomal peptide synthetase enzymology.

Authors:  Gene H Hur; Christopher R Vickery; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2012-07-17       Impact factor: 13.423

4.  Regulation and characterization of the dadRAX locus for D-amino acid catabolism in Pseudomonas aeruginosa PAO1.

Authors:  Weiqing He; Congran Li; Chung-Dar Lu
Journal:  J Bacteriol       Date:  2011-03-04       Impact factor: 3.490

5.  Generation of thiocillin ring size variants by prepeptide gene replacement and in vivo processing by Bacillus cereus.

Authors:  Albert A Bowers; Michael G Acker; Travis S Young; Christopher T Walsh
Journal:  J Am Chem Soc       Date:  2012-06-15       Impact factor: 15.419

6.  The ADEP Biosynthetic Gene Cluster in Streptomyces hawaiiensis NRRL 15010 Reveals an Accessory clpP Gene as a Novel Antibiotic Resistance Factor.

Authors:  Dhana Thomy; Elizabeth Culp; Martina Adamek; Eric Y Cheng; Nadine Ziemert; Gerard D Wright; Peter Sass; Heike Brötz-Oesterhelt
Journal:  Appl Environ Microbiol       Date:  2019-10-01       Impact factor: 4.792

7.  Biochemical and crystallographic analysis of substrate binding and conformational changes in acetyl-CoA synthetase.

Authors:  Albert S Reger; Jill M Carney; Andrew M Gulick
Journal:  Biochemistry       Date:  2007-05-12       Impact factor: 3.162

Review 8.  Ribosomal peptide natural products: bridging the ribosomal and nonribosomal worlds.

Authors:  John A McIntosh; Mohamed S Donia; Eric W Schmidt
Journal:  Nat Prod Rep       Date:  2009-04       Impact factor: 13.423

9.  Identification of the non-ribosomal peptide synthetase responsible for biosynthesis of the potential anti-cancer drug sansalvamide in Fusarium solani.

Authors:  Patricia Romans-Fuertes; Teis Esben Sondergaard; Manuela Ilse Helga Sandmann; Rasmus Dam Wollenberg; Kristian Fog Nielsen; Frederik T Hansen; Henriette Giese; Ditlev Egeskov Brodersen; Jens Laurids Sørensen
Journal:  Curr Genet       Date:  2016-03-02       Impact factor: 3.886

10.  Ribosomal synthesis of N-methyl peptides.

Authors:  Alexander O Subtelny; Matthew C T Hartman; Jack W Szostak
Journal:  J Am Chem Soc       Date:  2008-04-11       Impact factor: 15.419

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