Literature DB >> 15578825

Design, folding, and activities of metal-assembled coiled coil proteins.

Allison J Doerr1, George L McLendon.   

Abstract

Metal ions serve many purposes in natural proteins, from the stabilization of tertiary structure to the direction of protein folding to crucial roles in electron transfer and catalysis. There is considerable interest in creating metal binding sites in designed proteins to understand the structural role of metal ions and to design new metalloproteins with useful functions. The de novo design of metalloproteins and the role of metals in the folding of designed proteins are reviewed here, with particular focus on the design, folding, and activities of the [M(bpy-peptide)(3)](2+) structure. This maquette is constructed by the covalent attachment of 2,2'-bipyridine to the N-termini of amphiphilic peptides, and it is assembled into a folded trimeric coiled coil by the addition of a six-coordinate transition metal ion and the resulting hydrophobic collapse of the peptides. The [M(bpy-peptide)(3)](2+) structure has been employed in diverse applications, ranging from electron transfer pathway studies to the study of optimal hydrophobic packing in a virtual library to the construction of receptors and biosensors.

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Year:  2004        PMID: 15578825     DOI: 10.1021/ic0490573

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  10 in total

1.  Designing functional metalloproteins: from structural to catalytic metal sites.

Authors:  Melissa L Zastrow; Vincent L Pecoraro
Journal:  Coord Chem Rev       Date:  2013-09       Impact factor: 22.315

2.  Synthetic Control of Tertiary Helical Structures in Short Peptides.

Authors:  Michael G Wuo; Seong Ho Hong; Arunima Singh; Paramjit S Arora
Journal:  J Am Chem Soc       Date:  2018-11-14       Impact factor: 15.419

3.  Engineering a signal transduction mechanism for protein-based biosensors.

Authors:  Jonathan E Kohn; Kevin W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-26       Impact factor: 11.205

Review 4.  Protein design: toward functional metalloenzymes.

Authors:  Fangting Yu; Virginia M Cangelosi; Melissa L Zastrow; Matteo Tegoni; Jefferson S Plegaria; Alison G Tebo; Catherine S Mocny; Leela Ruckthong; Hira Qayyum; Vincent L Pecoraro
Journal:  Chem Rev       Date:  2014-03-24       Impact factor: 60.622

5.  Binding of small molecules to cavity forming mutants of a de novo designed protein.

Authors:  Aditi Das; Yinan Wei; Istvan Pelczer; Michael H Hecht
Journal:  Protein Sci       Date:  2011-03-07       Impact factor: 6.725

6.  Design of thiolate rich metal binding sites within a peptidic framework.

Authors:  Marek Łuczkowski; Monika Stachura; Virgil Schirf; Borries Demeler; Lars Hemmingsen; Vincent L Pecoraro
Journal:  Inorg Chem       Date:  2008-12-01       Impact factor: 5.165

7.  Molecular dynamics guided study of salt bridge length dependence in both fluorinated and non-fluorinated parallel dimeric coiled-coils.

Authors:  Scott S Pendley; Yihua B Yu; Thomas E Cheatham
Journal:  Proteins       Date:  2009-02-15

8.  Identifying important structural characteristics of arsenic resistance proteins by using designed three-stranded coiled coils.

Authors:  Debra S Touw; Christer E Nordman; Jeanne A Stuckey; Vincent L Pecoraro
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-03       Impact factor: 11.205

9.  Conformational control in a photoswitchable coiled coil.

Authors:  Justin M Torner; Paramjit S Arora
Journal:  Chem Commun (Camb)       Date:  2021-02-15       Impact factor: 6.222

10.  pH-dependent coordination of Pb2+ to metallothionein2: structures and insight into lead detoxification.

Authors:  Yonghui He; Mengmeng Liu; Narek Darabedian; Yizeng Liang; Deyin Wu; Juan Xiang; Feimeng Zhou
Journal:  Inorg Chem       Date:  2014-02-21       Impact factor: 5.165

  10 in total

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