Literature DB >> 15547260

Rubrerythrin from the hyperthermophilic archaeon Pyrococcus furiosus is a rubredoxin-dependent, iron-containing peroxidase.

Michael V Weinberg1, Francis E Jenney, Xiaoyuan Cui, Michael W W Adams.   

Abstract

Rubrerythrin was purified by multistep chromatography under anaerobic, reducing conditions from the hyperthermophilic archaeon Pyrococcus furiosus. It is a homodimer with a molecular mass of 39.2 kDa and contains 2.9 +/- 0.2 iron atoms per subunit. The purified protein had peroxidase activity at 85 degrees C using hydrogen peroxide with reduced P. furiosus rubredoxin as the electron donor. The specific activity was 36 micromol of rubredoxin oxidized/min/mg with apparent K(m) values of 35 and 70 microM for hydrogen peroxide and rubredoxin, respectively. When rubrerythrin was combined with rubredoxin and P. furiosus NADH:rubredoxin oxidoreductase, the complete system used NADH as the electron donor to reduce hydrogen peroxide with a specific activity of 7.0 micromol of H(2)O(2) reduced/min/mg of rubrerythrin at 85 degrees C. Strangely, as-purified (reduced) rubrerythrin precipitated when oxidized by either hydrogen peroxide, air, or ferricyanide. The gene (PF1283) encoding rubrerythrin was expressed in Escherichia coli grown in medium with various metal contents. The purified recombinant proteins each contained approximately three metal atoms/subunit, ranging from 0.4 Fe plus 2.2 Zn to 1.9 Fe plus 1.2 Zn, where the metal content of the protein depended on the metal content of the E. coli growth medium. The peroxidase activities of the recombinant forms were proportional to the iron content. P. furiosus rubrerythrin is the first to be characterized from a hyperthermophile or from an archaeon, and the results are the first demonstration that this protein functions in an NADH-dependent, hydrogen peroxide:rubredoxin oxidoreductase system. Rubrerythrin is proposed to play a role in the recently defined anaerobic detoxification pathway for reactive oxygen species.

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Year:  2004        PMID: 15547260      PMCID: PMC529063          DOI: 10.1128/JB.186.23.7888-7895.2004

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  39 in total

1.  Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology.

Authors:  F T Robb; D L Maeder; J R Brown; J DiRuggiero; M D Stump; R K Yeh; R B Weiss; D M Dunn
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

2.  Rubredoxin from Pyrococcus furiosus.

Authors:  F E Jenney; M W Adams
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

3.  Five-gene cluster in Clostridium thermoaceticum consisting of two divergent operons encoding rubredoxin oxidoreductase- rubredoxin and rubrerythrin-type A flavoprotein- high-molecular-weight rubredoxin.

Authors:  A Das; E D Coulter; D M Kurtz; L G Ljungdahl
Journal:  J Bacteriol       Date:  2001-03       Impact factor: 3.490

4.  Characterization of a catalase-peroxidase from the hyperthermophilic archaeon Archaeoglobus fulgidus.

Authors:  S W Kengen; F J Bikker; W R Hagen; W M de Vos; J van der Oost
Journal:  Extremophiles       Date:  2001-10       Impact factor: 2.395

5.  Transcriptional analysis of the rubrerythrin and superoxide dismutase genes of Clostridium perfringens.

Authors:  T A Geissmann; M Teuber; L Meile
Journal:  J Bacteriol       Date:  1999-11       Impact factor: 3.490

6.  A role for rubredoxin in oxidative stress protection in Desulfovibrio vulgaris: catalytic electron transfer to rubrerythrin and two-iron superoxide reductase.

Authors:  E D Coulter; D M Kurtz
Journal:  Arch Biochem Biophys       Date:  2001-10-01       Impact factor: 4.013

7.  A catalase-peroxidase from a newly isolated thermoalkaliphilic Bacillus sp. with potential for the treatment of textile bleaching effluents.

Authors:  M Gudelj; G O Fruhwirth; A Paar; F Lottspeich; K H Robra; A Cavaco-Paulo; G M Gübitz
Journal:  Extremophiles       Date:  2001-12       Impact factor: 2.395

8.  Role of rubrerythrin in the oxidative stress response of Porphyromonas gingivalis.

Authors:  Maryta Sztukowska; Marcin Bugno; Jan Potempa; James Travis; Donald M Kurtz
Journal:  Mol Microbiol       Date:  2002-04       Impact factor: 3.501

9.  Rubrerythrin from Clostridium perfringens: cloning of the gene, purification of the protein, and characterization of its superoxide dismutase function.

Authors:  Y Lehmann; L Meile; M Teuber
Journal:  J Bacteriol       Date:  1996-12       Impact factor: 3.490

Review 10.  Superoxide reductase: fact or fiction?

Authors:  Michael W W Adams; Francis E Jenney; Michael D Clay; Michael K Johnson
Journal:  J Biol Inorg Chem       Date:  2002-04-18       Impact factor: 3.358

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  42 in total

1.  Microarray analysis of the hyperthermophilic archaeon Pyrococcus furiosus exposed to gamma irradiation.

Authors:  Ernest Williams; Todd M Lowe; Jeffrey Savas; Jocelyne DiRuggiero
Journal:  Extremophiles       Date:  2006-08-08       Impact factor: 2.395

2.  Distinguishing features of delta-proteobacterial genomes.

Authors:  Samuel Karlin; Luciano Brocchieri; Jan Mrázek; Dale Kaiser
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-14       Impact factor: 11.205

3.  The crystal structure of the E. coli stress protein YciF.

Authors:  Aditya Hindupur; Deqian Liu; Yonghong Zhao; Henry D Bellamy; Mark A White; Robert O Fox
Journal:  Protein Sci       Date:  2006-09-25       Impact factor: 6.725

4.  Responses of wild-type and resistant strains of the hyperthermophilic bacterium Thermotoga maritima to chloramphenicol challenge.

Authors:  Clemente I Montero; Matthew R Johnson; Chung-Jung Chou; Shannon B Conners; Sarah G Geouge; Sabrina Tachdjian; Jason D Nichols; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2007-06-08       Impact factor: 4.792

5.  Novel multiprotein complexes identified in the hyperthermophilic archaeon Pyrococcus furiosus by non-denaturing fractionation of the native proteome.

Authors:  Angeli Lal Menon; Farris L Poole; Aleksandar Cvetkovic; Sunia A Trauger; Ewa Kalisiak; Joseph W Scott; Saratchandra Shanmukh; Jeremy Praissman; Francis E Jenney; William R Wikoff; John V Apon; Gary Siuzdak; Michael W W Adams
Journal:  Mol Cell Proteomics       Date:  2008-11-28       Impact factor: 5.911

6.  Characterization of NADH oxidase/NADPH polysulfide oxidoreductase and its unexpected participation in oxygen sensitivity in an anaerobic hyperthermophilic archaeon.

Authors:  Hiroki Kobori; Masayuki Ogino; Izumi Orita; Satoshi Nakamura; Tadayuki Imanaka; Toshiaki Fukui
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

7.  In vitro reconstitution of an NADPH-dependent superoxide reduction pathway from Pyrococcus furiosus.

Authors:  Amy M Grunden; Francis E Jenney; Kesen Ma; Mikyoung Ji; Michael V Weinberg; Michael W W Adams
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

8.  Mechanism of oxygen detoxification by the surprisingly oxygen-tolerant hyperthermophilic archaeon, Pyrococcus furiosus.

Authors:  Michael P Thorgersen; Karen Stirrett; Robert A Scott; Michael W W Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-23       Impact factor: 11.205

9.  Bacterial lifestyle in a deep-sea hydrothermal vent chimney revealed by the genome sequence of the thermophilic bacterium Deferribacter desulfuricans SSM1.

Authors:  Yoshihiro Takaki; Shigeru Shimamura; Satoshi Nakagawa; Yasuo Fukuhara; Hiroshi Horikawa; Akiho Ankai; Takeshi Harada; Akira Hosoyama; Akio Oguchi; Shigehiro Fukui; Nobuyuki Fujita; Hideto Takami; Ken Takai
Journal:  DNA Res       Date:  2010-02-26       Impact factor: 4.458

10.  Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea.

Authors:  Yvan Zivanovic; Jean Armengaud; Arnaud Lagorce; Christophe Leplat; Philippe Guérin; Murielle Dutertre; Véronique Anthouard; Patrick Forterre; Patrick Wincker; Fabrice Confalonieri
Journal:  Genome Biol       Date:  2009-06-26       Impact factor: 13.583

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