Literature DB >> 15746356

In vitro reconstitution of an NADPH-dependent superoxide reduction pathway from Pyrococcus furiosus.

Amy M Grunden1, Francis E Jenney, Kesen Ma, Mikyoung Ji, Michael V Weinberg, Michael W W Adams.   

Abstract

A scheme for the detoxification of superoxide in Pyrococcus furiosus has been previously proposed in which superoxide reductase (SOR) reduces (rather than dismutates) superoxide to hydrogen peroxide by using electrons from reduced rubredoxin (Rd). Rd is reduced with electrons from NAD(P)H by the enzyme NAD(P)H:rubredoxin oxidoreductase (NROR). The goal of the present work was to reconstitute this pathway in vitro using recombinant enzymes. While recombinant forms of SOR and Rd are available, the gene encoding P. furiosus NROR (PF1197) was found to be exceedingly toxic to Escherichia coli, and an active recombinant form (rNROR) was obtained via a fusion protein expression system, which produced an inactive form of NROR until cleavage. This allowed the complete pathway from NAD(P)H to the reduction of SOR via NROR and Rd to be reconstituted in vitro using recombinant proteins. rNROR is a 39.9-kDa protein whose sequence contains both flavin adenine dinucleotide (FAD)- and NAD(P)H-binding motifs, and it shares significant similarity with known and putative Rd-dependent oxidoreductases from several anaerobic bacteria, both mesophilic and hyperthermophilic. FAD was shown to be essential for activity in reconstitution assays and could not be replaced by flavin mononucleotide (FMN). The bound FAD has a midpoint potential of -173 mV at 23 degrees C (-193 mV at 80 degrees C). Like native NROR, the recombinant enzyme catalyzed the NADPH-dependent reduction of rubredoxin both at high (80 degrees C) and low (23 degrees C) temperatures, consistent with its proposed role in the superoxide reduction pathway. This is the first demonstration of in vitro superoxide reduction to hydrogen peroxide using NAD(P)H as the electron donor in an SOR-mediated pathway.

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Year:  2005        PMID: 15746356      PMCID: PMC1065123          DOI: 10.1128/AEM.71.3.1522-1530.2005

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  38 in total

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Journal:  Biochemistry       Date:  1999-06-15       Impact factor: 3.162

2.  A hyperactive NAD(P)H:Rubredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus.

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Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

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Journal:  Adv Protein Chem       Date:  1996

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Journal:  DNA Res       Date:  1998-04-30       Impact factor: 4.458

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Journal:  Eur J Biochem       Date:  1999-01

6.  Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima.

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Journal:  Nature       Date:  1999-05-27       Impact factor: 49.962

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Journal:  Nature       Date:  1997-11-27       Impact factor: 49.962

8.  Anaerobic microbes: oxygen detoxification without superoxide dismutase.

Authors:  F E Jenney; M F Verhagen; X Cui; M W Adams
Journal:  Science       Date:  1999-10-08       Impact factor: 47.728

9.  Flavin-dependent alkyl hydroperoxide reductase from Salmonella typhimurium. 1. Purification and enzymatic activities of overexpressed AhpF and AhpC proteins.

Authors:  L B Poole; H R Ellis
Journal:  Biochemistry       Date:  1996-01-09       Impact factor: 3.162

10.  X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.

Authors:  M W Day; B T Hsu; L Joshua-Tor; J B Park; Z H Zhou; M W Adams; D C Rees
Journal:  Protein Sci       Date:  1992-11       Impact factor: 6.725

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  20 in total

1.  The archaeon Methanosarcina acetivorans contains a protein disulfide reductase with an iron-sulfur cluster.

Authors:  Daniel J Lessner; James G Ferry
Journal:  J Bacteriol       Date:  2007-08-03       Impact factor: 3.490

2.  Responses of wild-type and resistant strains of the hyperthermophilic bacterium Thermotoga maritima to chloramphenicol challenge.

Authors:  Clemente I Montero; Matthew R Johnson; Chung-Jung Chou; Shannon B Conners; Sarah G Geouge; Sabrina Tachdjian; Jason D Nichols; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2007-06-08       Impact factor: 4.792

3.  Intermolecular electron transfer in two-iron superoxide reductase: a putative role for the desulforedoxin center as an electron donor to the iron active site.

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Journal:  J Biol Inorg Chem       Date:  2011-05-18       Impact factor: 3.358

4.  Characterization of NADH oxidase/NADPH polysulfide oxidoreductase and its unexpected participation in oxygen sensitivity in an anaerobic hyperthermophilic archaeon.

Authors:  Hiroki Kobori; Masayuki Ogino; Izumi Orita; Satoshi Nakamura; Tadayuki Imanaka; Toshiaki Fukui
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

5.  Adaptive responses to oxygen stress in obligatory anaerobes Clostridium acetobutylicum and Clostridium aminovalericum.

Authors:  Shinji Kawasaki; Yusuke Watamura; Masaki Ono; Toshihiro Watanabe; Kouji Takeda; Youichi Niimura
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

Review 6.  Concepts of oxidative stress and antioxidant defense in Crohn's disease.

Authors:  Mohammed A Alzoghaibi
Journal:  World J Gastroenterol       Date:  2013-10-21       Impact factor: 5.742

7.  Mechanism of oxygen detoxification by the surprisingly oxygen-tolerant hyperthermophilic archaeon, Pyrococcus furiosus.

Authors:  Michael P Thorgersen; Karen Stirrett; Robert A Scott; Michael W W Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-23       Impact factor: 11.205

8.  Analysis of the complete genome of Fervidococcus fontis confirms the distinct phylogenetic position of the order Fervidicoccales and suggests its environmental function.

Authors:  Alexander V Lebedinsky; Andrey V Mardanov; Ilya V Kublanov; Vadim M Gumerov; Alexey V Beletsky; Anna A Perevalova; Salima Kh Bidzhieva; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin; Nikolai V Ravin
Journal:  Extremophiles       Date:  2013-12-24       Impact factor: 2.395

9.  Biochemical and structural characterization of a novel family of cystathionine beta-synthase domain proteins fused to a Zn ribbon-like domain.

Authors:  Michael Proudfoot; Stephen A Sanders; Alex Singer; Rongguang Zhang; Greg Brown; Andrew Binkowski; Linda Xu; Jonathan A Lukin; Alexey G Murzin; Andrzej Joachimiak; Cheryl H Arrowsmith; Aled M Edwards; Alexei V Savchenko; Alexander F Yakunin
Journal:  J Mol Biol       Date:  2007-11-01       Impact factor: 5.469

10.  Kinetics studies of the superoxide-mediated electron transfer reactions between rubredoxin-type proteins and superoxide reductases.

Authors:  Françoise Auchère; Sofia R Pauleta; Pedro Tavares; Isabel Moura; José J G Moura
Journal:  J Biol Inorg Chem       Date:  2006-03-17       Impact factor: 3.358

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