Literature DB >> 15531610

CGH-Explorer: a program for analysis of array-CGH data.

Ole Christian Lingjaerde1, Lars O Baumbusch, Knut Liestøl, Ingrid K Glad, Anne-Lise Børresen-Dale.   

Abstract

SUMMARY: CGH-Explorer is a program for visualization and statistical analysis of microarray-based comparative genomic hybridization (array-CGH) data. The program has preprocessing facilities, tools for graphical exploration of individual arrays or groups of arrays, and tools for statistical identification of regions of amplification and deletion.

Mesh:

Year:  2004        PMID: 15531610     DOI: 10.1093/bioinformatics/bti113

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  71 in total

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Journal:  Eur J Hum Genet       Date:  2008-11-12       Impact factor: 4.246

5.  Bayesian Frequentist hybrid Model wth Application to the Analysis of Gene Copy Number Changes.

Authors:  Ao Yuan; Guanjie Chen; Juan Xiong; Wenqing He; Charles Rotimi
Journal:  J Appl Stat       Date:  2011       Impact factor: 1.404

Review 6.  Statistical issues in the analysis of DNA Copy Number Variations.

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Journal:  Int J Comput Biol Drug Des       Date:  2008

7.  Genome-wide linkage scan reveals three putative breast-cancer-susceptibility loci.

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Journal:  Am J Hum Genet       Date:  2009-01-15       Impact factor: 11.025

8.  Combining chromosomal arm status and significantly aberrant genomic locations reveals new cancer subtypes.

Authors:  Tal Shay; Wanyu L Lambiv; Anat Reiner-Benaim; Monika E Hegi; Eytan Domany
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9.  Mechanisms of FUS1/TUSC2 deficiency in mesothelioma and its tumorigenic transcriptional effects.

Authors:  Alla V Ivanova; Sergey V Ivanov; Ljudmila Prudkin; Daisuke Nonaka; Zhandong Liu; Anne Tsao; Ignacio Wistuba; Jack Roth; Harvey I Pass
Journal:  Mol Cancer       Date:  2009-10-24       Impact factor: 27.401

10.  RJaCGH: Bayesian analysis of aCGH arrays for detecting copy number changes and recurrent regions.

Authors:  Oscar M Rueda; Ramon Diaz-Uriarte
Journal:  Bioinformatics       Date:  2009-05-06       Impact factor: 6.937

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