Literature DB >> 15531159

A platypus' eye view of the mammalian genome.

Frank Grützner1, Jennifer A Marshall Graves.   

Abstract

The genome of monotremes, like the animals themselves, is unique and strange. The importance of monotremes to genomics depends on their position as the earliest offshoot of the mammalian lineage. Although there has been controversy in the literature over the phylogenetic position of monotremes, this traditional interpretation is now confirmed by recent sequence comparisons. Characterizing the monotreme genome will therefore be important for studying the evolution and organization of the mammalian genome, and the proposal to sequence the platypus genome has been received enthusiastically by the genomics community. Recent investigations of X-chromosome inactivation, genomic imprinting and sex chromosome evolution provide good examples of the power of the monotreme genome to inform us about mammalian genome organization and evolution.

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Year:  2004        PMID: 15531159     DOI: 10.1016/j.gde.2004.09.006

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  13 in total

1.  Core-SINE blocks comprise a large fraction of monotreme genomes; implications for vertebrate chromosome evolution.

Authors:  Patrick J Kirby; Ian K Greaves; Edda Koina; Paul D Waters; Jennifer A Marshall Graves
Journal:  Chromosome Res       Date:  2008-01-09       Impact factor: 5.239

2.  The region homologous to the X-chromosome inactivation centre has been disrupted in marsupial and monotreme mammals.

Authors:  Timothy A Hore; Edda Koina; Matthew J Wakefield; Jennifer A Marshall Graves
Journal:  Chromosome Res       Date:  2007-03-05       Impact factor: 5.239

3.  Mutational analyses of UPIIIA, SHH, EFNB2 and HNF1beta in persistent cloaca and associated kidney malformations.

Authors:  Dagan Jenkins; Maria Bitner-Glindzicz; Louise Thomasson; Sue Malcolm; Stephanie A Warne; Sally A Feather; Sarah E Flanagan; Sian Ellard; Coralie Bingham; Lane Santos; Mark Henkemeyer; Andrew Zinn; Linda A Baker; Duncan T Wilcox; Adrian S Woolf
Journal:  J Pediatr Urol       Date:  2007-02       Impact factor: 1.830

4.  Expanded HOXA13 polyalanine tracts in a monotreme.

Authors:  Jessica A Lehoczky; Jeffrey W Innis
Journal:  Evol Dev       Date:  2008 Jul-Aug       Impact factor: 1.930

5.  Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes.

Authors:  Frédéric Veyrunes; Paul D Waters; Pat Miethke; Willem Rens; Daniel McMillan; Amber E Alsop; Frank Grützner; Janine E Deakin; Camilla M Whittington; Kyriena Schatzkamer; Colin L Kremitzki; Tina Graves; Malcolm A Ferguson-Smith; Wes Warren; Jennifer A Marshall Graves
Journal:  Genome Res       Date:  2008-05-07       Impact factor: 9.043

6.  Characterizing the chromosomes of the platypus (Ornithorhynchus anatinus).

Authors:  Daniel McMillan; Pat Miethke; Amber E Alsop; Willem Rens; Patricia O'Brien; Vladimir Trifonov; Frederic Veyrunes; Kyriena Schatzkamer; Colin L Kremitzki; Tina Graves; Wesley Warren; Frank Grützner; Malcolm A Ferguson-Smith; Jennifer A Marshall Graves
Journal:  Chromosome Res       Date:  2008-01-09       Impact factor: 5.239

7.  Insights into the evolution of mammalian telomerase: platypus TERT shares similarities with genes of birds and other reptiles and localizes on sex chromosomes.

Authors:  Radmila Hrdličková; Jiří Nehyba; Shu Ly Lim; Frank Grützner; Henry R Bose
Journal:  BMC Genomics       Date:  2012-06-01       Impact factor: 3.969

8.  Protein immunolocalization supports the presence of identical mechanisms of XY body formation in eutherians and marsupials.

Authors:  M J Franco; R B Sciurano; A J Solari
Journal:  Chromosome Res       Date:  2007-09-13       Impact factor: 4.620

9.  Ancient genomic architecture for mammalian olfactory receptor clusters.

Authors:  Ronny Aloni; Tsviya Olender; Doron Lancet
Journal:  Genome Biol       Date:  2006-10-01       Impact factor: 13.583

10.  CpG island density and its correlations with genomic features in mammalian genomes.

Authors:  Leng Han; Bing Su; Wen-Hsiung Li; Zhongming Zhao
Journal:  Genome Biol       Date:  2008-05-13       Impact factor: 13.583

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