Literature DB >> 15530361

Crystal structure of PriB, a component of the Escherichia coli replication restart primosome.

Matthew Lopper1, James M Holton, James L Keck.   

Abstract

Maintenance of genome stability following DNA damage requires origin-independent reinitiation of DNA replication at repaired replication forks. In E. coli, PriA, PriB, PriC, and DnaT play critical roles in recognizing repaired replication forks and reloading the replisome onto the template to reinitiate DNA replication. Here, we report the 2.0 A resolution crystal structure of E. coli PriB, revealing a dimer that consists of a single structural domain formed by two oligonucleotide/oligosaccharide binding (OB) folds. Structural similarity of PriB to single-stranded DNA binding proteins reveals insights into its mechanisms of DNA binding. The structure further establishes a putative protein interaction surface that may contribute to the role of PriB in primosome assembly by facilitating interactions with PriA and DnaT. This is the first high-resolution structure of a protein involved in oriC-independent replisome loading and provides unique insight into mechanisms of replication restart in E. coli.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15530361     DOI: 10.1016/j.str.2004.09.004

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  17 in total

1.  A hand-off mechanism for primosome assembly in replication restart.

Authors:  Matthew Lopper; Ruethairat Boonsombat; Steven J Sandler; James L Keck
Journal:  Mol Cell       Date:  2007-06-22       Impact factor: 17.970

Review 2.  SSB as an organizer/mobilizer of genome maintenance complexes.

Authors:  Robert D Shereda; Alexander G Kozlov; Timothy M Lohman; Michael M Cox; James L Keck
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 Sep-Oct       Impact factor: 8.250

3.  Function of a strand-separation pin element in the PriA DNA replication restart helicase.

Authors:  Tricia A Windgassen; Maxime Leroux; Steven J Sandler; James L Keck
Journal:  J Biol Chem       Date:  2018-12-28       Impact factor: 5.157

4.  Identification of Subunit Binding Positions on a Model Fork and Displacements That Occur during Sequential Assembly of the Escherichia coli Primosome.

Authors:  Carol M Manhart; Charles S McHenry
Journal:  J Biol Chem       Date:  2015-03-05       Impact factor: 5.157

5.  Structures of a key interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies.

Authors:  Meiting Wu; Young-Jun Park; Els Pardon; Stewart Turley; Andrew Hayhurst; Junpeng Deng; Jan Steyaert; Wim G J Hol
Journal:  J Struct Biol       Date:  2010-10-20       Impact factor: 2.867

6.  Interactions of the Escherichia coli primosomal PriB protein with the single-stranded DNA. Stoichiometries, intrinsic affinities, cooperativities, and base specificities.

Authors:  Michal R Szymanski; Maria J Jezewska; Wlodzimierz Bujalowski
Journal:  J Mol Biol       Date:  2010-02-12       Impact factor: 5.469

7.  Dimeric structure of the N-terminal domain of PriB protein from Thermoanaerobacter tengcongensis solved ab initio.

Authors:  Dorothee Liebschner; Krzysztof Brzezinski; Miroslawa Dauter; Zbigniew Dauter; Marta Nowak; Józef Kur; Marcin Olszewski
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-11-09

8.  The priB gene of Klebsiella pneumoniae encodes a 104-amino acid protein that is similar in structure and function to Escherichia coli PriB.

Authors:  Linda Berg; Matthew E Lopper
Journal:  PLoS One       Date:  2011-09-08       Impact factor: 3.240

9.  A bacterial PriB with weak single-stranded DNA binding activity can stimulate the DNA unwinding activity of its cognate PriA helicase.

Authors:  Cui Feng; Bharath Sunchu; Mallory E Greenwood; Matthew E Lopper
Journal:  BMC Microbiol       Date:  2011-08-23       Impact factor: 3.605

10.  The crystal structure of Neisseria gonorrhoeae PriB reveals mechanistic differences among bacterial DNA replication restart pathways.

Authors:  Jinlan Dong; Nicholas P George; Katrina L Duckett; Madeleine A P DeBeer; Matthew E Lopper
Journal:  Nucleic Acids Res       Date:  2009-11-11       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.