Literature DB >> 15519315

The alignment, structure and dynamics of membrane-associated polypeptides by solid-state NMR spectroscopy.

Burkhard Bechinger1, Christopher Aisenbrey, Philippe Bertani.   

Abstract

Solid-state NMR spectroscopy is being developed at a fast pace for the structural investigation of immobilized and non-crystalline biomolecules. These include proteins and peptides associated with phospholipid bilayers. In contrast to solution NMR spectroscopy, where complete or almost complete averaging leads to isotropic values, the anisotropic character of nuclear interactions is apparent in solid-state NMR spectra. In static samples the orientation dependence of chemical shift, dipolar or quadrupolar interactions, therefore, provides angular constraints when the polypeptides have been reconstituted into oriented membranes. Furthermore, solid-state NMR spectroscopy of aligned samples offers distinct advantages in allowing access to dynamic processes such as topological equilibria or rotational diffusion in membrane environments. Alternatively, magic angle sample spinning (MAS) results in highly resolved NMR spectra, provided that the sample is sufficiently homogenous. MAS spinning solid-state NMR spectra allow to measure distances and dihedral angles with high accuracy. The technique has recently been developed to selectively establish through-space and through-bond correlations between nuclei, similar to the approaches well-established in solution-NMR spectroscopy.

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Year:  2004        PMID: 15519315     DOI: 10.1016/j.bbamem.2004.08.008

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  25 in total

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Review 2.  Lipid membrane-induced optimization for ligand-receptor docking: recent tools and insights for the "membrane catalysis" model.

Authors:  Miguel A R B Castanho; Miguel X Fernandes
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3.  The dynamic orientation of membrane-bound peptides: bridging simulations and experiments.

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4.  Peptide aggregation and pore formation in a lipid bilayer: a combined coarse-grained and all atom molecular dynamics study.

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5.  Amphipathic antimicrobial piscidin in magnetically aligned lipid bilayers.

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6.  Oriented samples: a tool for determining the membrane topology and the mechanism of action of cationic antimicrobial peptides by solid-state NMR.

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Journal:  Biophys Rev       Date:  2015-02-24

7.  The development of solid-state NMR of membrane proteins.

Authors:  Stanley J Opella
Journal:  Biomed Spectrosc Imaging       Date:  2014

Review 8.  The roles of antimicrobial peptides in innate host defense.

Authors:  Gill Diamond; Nicholas Beckloff; Aaron Weinberg; Kevin O Kisich
Journal:  Curr Pharm Des       Date:  2009       Impact factor: 3.116

9.  Structure and membrane interactions of the antibiotic peptide dermadistinctin K by multidimensional solution and oriented 15N and 31P solid-state NMR spectroscopy.

Authors:  Rodrigo M Verly; Cléria Mendonça de Moraes; Jarbas M Resende; Christopher Aisenbrey; Marcelo Porto Bemquerer; Dorila Piló-Veloso; Ana Paula Valente; Fábio C L Almeida; Burkhard Bechinger
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

10.  Helix orientations in membrane-associated Bcl-X(L) determined by 15N-solid-state NMR spectroscopy.

Authors:  Christopher Aisenbrey; U S Sudheendra; Helen Ridley; Philippe Bertani; Arnaud Marquette; Svetlana Nedelkina; Jeremy H Lakey; Burkhard Bechinger
Journal:  Eur Biophys J       Date:  2007-05-10       Impact factor: 1.733

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