Literature DB >> 19289046

Structure and membrane interactions of the antibiotic peptide dermadistinctin K by multidimensional solution and oriented 15N and 31P solid-state NMR spectroscopy.

Rodrigo M Verly1, Cléria Mendonça de Moraes, Jarbas M Resende, Christopher Aisenbrey, Marcelo Porto Bemquerer, Dorila Piló-Veloso, Ana Paula Valente, Fábio C L Almeida, Burkhard Bechinger.   

Abstract

DD K, a peptide first isolated from the skin secretion of the Phyllomedusa distincta frog, has been prepared by solid-phase chemical peptide synthesis and its conformation was studied in trifluoroethanol/water as well as in the presence of sodium dodecyl sulfate and dodecylphosphocholine micelles or small unilamellar vesicles. Multidimensional solution NMR spectroscopy indicates an alpha-helical conformation in membrane environments starting at residue 7 and extending to the C-terminal carboxyamide. Furthermore, DD K has been labeled with (15)N at a single alanine position that is located within the helical core region of the sequence. When reconstituted into oriented phosphatidylcholine membranes the resulting (15)N solid-state NMR spectrum shows a well-defined helix alignment parallel to the membrane surface in excellent agreement with the amphipathic character of DD K. Proton-decoupled (31)P solid-state NMR spectroscopy indicates that the peptide creates a high level of disorder at the level of the phospholipid headgroup suggesting that DD K partitions into the bilayer where it severely disrupts membrane packing.

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Year:  2009        PMID: 19289046      PMCID: PMC2717305          DOI: 10.1016/j.bpj.2008.11.063

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  77 in total

Review 1.  Diversity of antimicrobial peptides and their mechanisms of action.

Authors:  R M Epand; H J Vogel
Journal:  Biochim Biophys Acta       Date:  1999-12-15

2.  Dermaseptins from Phyllomedusa oreades and Phyllomedusa distincta: liposomes fusion and/or lysis investigated by fluorescence and atomic force microscopy.

Authors:  Luciano P Silva; José Roberto S A Leite; Guilherme D Brand; Willian B Regis; Antonio C Tedesco; Ricardo B Azevedo; Sonia M Freitas; Carlos Bloch
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2007-03-03       Impact factor: 2.320

3.  Effect of cholesterol on the interaction of the amphibian antimicrobial peptide DD K with liposomes.

Authors:  Rodrigo M Verly; Magali A Rodrigues; Katia Regina P Daghastanli; Angelo Márcio L Denadai; Iolanda M Cuccovia; Carlos Bloch; Frédéric Frézard; Marcelo M Santoro; Dorila Piló-Veloso; Marcelo P Bemquerer
Journal:  Peptides       Date:  2007-11-17       Impact factor: 3.750

4.  The membrane alignment of helical peptides from non-oriented 15N chemical shift solid-state NMR spectroscopy.

Authors:  Lydia Prongidi-Fix; Philippe Bertani; Burkhard Bechinger
Journal:  J Am Chem Soc       Date:  2007-06-16       Impact factor: 15.419

5.  A quantitative model for the all-or-none permeabilization of phospholipid vesicles by the antimicrobial peptide cecropin A.

Authors:  Sonia M Gregory; Allison Cavenaugh; Velvet Journigan; Antje Pokorny; Paulo F F Almeida
Journal:  Biophys J       Date:  2007-10-05       Impact factor: 4.033

6.  Zwitterionic phospholipids and sterols modulate antimicrobial peptide-induced membrane destabilization.

Authors:  A James Mason; Arnaud Marquette; Burkhard Bechinger
Journal:  Biophys J       Date:  2007-08-31       Impact factor: 4.033

7.  Membrane topology of a 14-mer model amphipathic peptide: a solid-state NMR spectroscopy study.

Authors:  Marise Ouellet; Jean-Daniel Doucet; Normand Voyer; Michèle Auger
Journal:  Biochemistry       Date:  2007-05-08       Impact factor: 3.162

8.  Pore structure, thinning effect, and lateral diffusive dynamics of oriented lipid membranes interacting with antimicrobial peptide protegrin-1: 31P and 2H solid-state NMR study.

Authors:  Sungsool Wi; Chul Kim
Journal:  J Phys Chem B       Date:  2008-08-14       Impact factor: 2.991

9.  Solution NMR structures of the antimicrobial peptides phylloseptin-1, -2, and -3 and biological activity: the role of charges and hydrogen bonding interactions in stabilizing helix conformations.

Authors:  Jarbas M Resende; Cléria Mendonça Moraes; Maura V Prates; Amary Cesar; Fabio C L Almeida; Nathália C C R Mundim; Ana Paula Valente; Marcelo P Bemquerer; Dorila Piló-Veloso; Burkhard Bechinger
Journal:  Peptides       Date:  2008-07-04       Impact factor: 3.750

10.  Determining the orientation of uniaxially rotating membrane proteins using unoriented samples: a 2H, 13C, AND 15N solid-state NMR investigation of the dynamics and orientation of a transmembrane helical bundle.

Authors:  Sarah D Cady; Catherine Goodman; Chad D Tatko; William F DeGrado; Mei Hong
Journal:  J Am Chem Soc       Date:  2007-04-07       Impact factor: 15.419

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  13 in total

1.  Structure and topology of the huntingtin 1-17 membrane anchor by a combined solution and solid-state NMR approach.

Authors:  Matthias Michalek; Evgeniy S Salnikov; Burkhard Bechinger
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

2.  Membrane structure and conformational changes of the antibiotic heterodimeric peptide distinctin by solid-state NMR spectroscopy.

Authors:  Jarbas M Resende; Cléria Mendonça Moraes; Victor H O Munhoz; Christopher Aisenbrey; Rodrigo M Verly; Philippe Bertani; Amary Cesar; Dorila Piló-Veloso; Burkhard Bechinger
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-14       Impact factor: 11.205

3.  Oriented samples: a tool for determining the membrane topology and the mechanism of action of cationic antimicrobial peptides by solid-state NMR.

Authors:  Matthieu Fillion; Michèle Auger
Journal:  Biophys Rev       Date:  2015-02-24

4.  Lipid-Mediated Interactions between the Antimicrobial Peptides Magainin 2 and PGLa in Bilayers.

Authors:  Nicole Harmouche; Burkhard Bechinger
Journal:  Biophys J       Date:  2018-08-16       Impact factor: 4.033

5.  Membrane interactions of phylloseptin-1, -2, and -3 peptides by oriented solid-state NMR spectroscopy.

Authors:  Jarbas M Resende; Rodrigo M Verly; Christopher Aisenbrey; Amary Cesar; Philippe Bertani; Dorila Piló-Veloso; Burkhard Bechinger
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

6.  NMR structures of the histidine-rich peptide LAH4 in micellar environments: membrane insertion, pH-dependent mode of antimicrobial action, and DNA transfection.

Authors:  Julia Georgescu; Victor H O Munhoz; Burkhard Bechinger
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

7.  Elastin, a novel extracellular matrix protein adhering to mycobacterial antigen 85 complex.

Authors:  Chih-Jung Kuo; Christopher P Ptak; Ching-Lin Hsieh; Bruce L Akey; Yung-Fu Chang
Journal:  J Biol Chem       Date:  2012-12-17       Impact factor: 5.157

8.  (31)P solid-state NMR based monitoring of permeation of cell penetrating peptides into skin.

Authors:  Pinaki R Desai; Ashley R Cormier; Punit P Shah; Ram R Patlolla; Anant K Paravastu; Mandip Singh
Journal:  Eur J Pharm Biopharm       Date:  2013-05-20       Impact factor: 5.571

9.  Membrane interactions of Ocellatins. Where do antimicrobial gaps stem from?

Authors:  José Muñoz-López; Jade C L Oliveira; Daniel A G R Michel; Carolina S Ferreira; Francisco Gomes Neto; Evgeniy S Salnikov; Rodrigo M Verly; Burkhard Bechinger; Jarbas M Resende
Journal:  Amino Acids       Date:  2021-07-12       Impact factor: 3.520

10.  Activity determinants of helical antimicrobial peptides: a large-scale computational study.

Authors:  Yi He; Themis Lazaridis
Journal:  PLoS One       Date:  2013-06-12       Impact factor: 3.240

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