Literature DB >> 16217647

Lipid membrane-induced optimization for ligand-receptor docking: recent tools and insights for the "membrane catalysis" model.

Miguel A R B Castanho1, Miguel X Fernandes.   

Abstract

Cells in living organisms are regulated by chemical and physical stimuli from their environment. Often, ligands interact with membrane receptors to trigger responses and Sargent and Schwyzer conceived a model to describe this process, "membrane catalysis". There is a notion that the physical organization of membranes can control the response of cells by speeding up reactions. We revisit the "membrane catalysis" model in the light of recent technical, methodological and theoretical advances and how they can be exploited to highlight the details of membrane mediated ligand-receptor interactions. We examine the possible effects that ligand concentration causes in the membrane catalysis and focus our attention in techniques used to determine the partition constant. The hypothetical diffusional advantage associated with membrane catalysis is discussed and the applicability of existing models is assessed. The role of in-depth location and orientation of ligands is explored emphasizing the contribution of new analysis methods and spectroscopic techniques. Results suggest that membranes can optimize the interaction between ligands and receptors through several different effects but the relative contribution of each must be carefully investigated. We certainly hope that the conjugation of the methodological and technical advances here reported will revive the interest in the membrane catalysis model.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16217647     DOI: 10.1007/s00249-005-0007-9

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  45 in total

Review 1.  Quantifying molecular partition into model systems of biomembranes: an emphasis on optical spectroscopic methods.

Authors:  Nuno C Santos; Manuel Prieto; Miguel A R B Castanho
Journal:  Biochim Biophys Acta       Date:  2003-06-10

Review 2.  In search of the 'bio-active conformation'--is it induced by the target cell membrane?

Authors:  R Schwyzer
Journal:  J Mol Recognit       Date:  1995 Jan-Apr       Impact factor: 2.137

Review 3.  Emerging techniques for investigating molecular interactions at lipid membranes.

Authors:  S Heyse; T Stora; E Schmid; J H Lakey; H Vogel
Journal:  Biochim Biophys Acta       Date:  1998-11-10

Review 4.  HIV entry and its inhibition.

Authors:  D C Chan; P S Kim
Journal:  Cell       Date:  1998-05-29       Impact factor: 41.582

Review 5.  Distribution analysis of depth-dependent fluorescence quenching in membranes: a practical guide.

Authors:  A S Ladokhin
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  Physical modulation of intracellular signaling processes by locational regulation.

Authors:  J M Haugh; D A Lauffenburger
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

7.  Reduction-of-dimensionality kinetics at reaction-limited cell surface receptors.

Authors:  D Axelrod; M D Wang
Journal:  Biophys J       Date:  1994-03       Impact factor: 4.033

8.  Effect of orientational order on the decay of the fluorescence anisotropy in membrane suspensions. A new approximate solution of the rotational diffusion equation.

Authors:  W van der Meer; H Pottel; W Herreman; M Ameloot; H Hendrickx; H Schröder
Journal:  Biophys J       Date:  1984-10       Impact factor: 4.033

9.  Lipidic membranes are potential "catalysts" in the ligand activity of the multifunctional pentapeptide neokyotorphin.

Authors:  Sílvia C D N Lopes; Aleksander Fedorov; Miguel A R B Castanho
Journal:  Chembiochem       Date:  2005-04       Impact factor: 3.164

10.  Filipin orientation revealed by linear dichroism. Implication for a model of action.

Authors:  Sílvia C D N Lopes; Erik Goormaghtigh; Benedito J Costa Cabral; Miguel A R B Castanho
Journal:  J Am Chem Soc       Date:  2004-05-05       Impact factor: 15.419

View more
  12 in total

1.  Mathematical modelling and computational study of two-dimensional and three-dimensional dynamics of receptor-ligand interactions in signalling response mechanisms.

Authors:  Pilar García-Peñarrubia; Juan J Gálvez; Jesús Gálvez
Journal:  J Math Biol       Date:  2013-07-28       Impact factor: 2.259

2.  Specific membrane binding of neurotoxin II can facilitate its delivery to acetylcholine receptor.

Authors:  Dmitry M Lesovoy; Eduard V Bocharov; Ekaterina N Lyukmanova; Yurij A Kosinsky; Mikhail A Shulepko; Dmitry A Dolgikh; Mikhail P Kirpichnikov; Roman G Efremov; Alexander S Arseniev
Journal:  Biophys J       Date:  2009-10-07       Impact factor: 4.033

3.  Using zeta-potential measurements to quantify peptide partition to lipid membranes.

Authors:  João M Freire; Marco M Domingues; Joana Matos; Manuel N Melo; Ana Salomé Veiga; Nuno C Santos; Miguel A R B Castanho
Journal:  Eur Biophys J       Date:  2011-01-13       Impact factor: 1.733

4.  Cholesterol and lipid phases influence the interactions between serotonin receptor agonists and lipid bilayers.

Authors:  Rebecca Batchelor; Christopher J Windle; Sébastien Buchoux; Mark Lorch
Journal:  J Biol Chem       Date:  2010-10-20       Impact factor: 5.157

5.  Molecular mechanisms for the persistent bronchodilatory effect of the beta 2-adrenoceptor agonist salmeterol.

Authors:  A Szczuka; M Wennerberg; A Packeu; G Vauquelin
Journal:  Br J Pharmacol       Date:  2009-07-07       Impact factor: 8.739

6.  HIV-1 fusion inhibitor peptides enfuvirtide and T-1249 interact with erythrocyte and lymphocyte membranes.

Authors:  Pedro M Matos; Miguel A R B Castanho; Nuno C Santos
Journal:  PLoS One       Date:  2010-03-23       Impact factor: 3.240

7.  Lipophilic lysine-spermine conjugates are potent polyamine transport inhibitors for use in combination with a polyamine biosynthesis inhibitor.

Authors:  Mark R Burns; Gerard F Graminski; Reitha S Weeks; Yan Chen; Thomas G O'Brien
Journal:  J Med Chem       Date:  2009-04-09       Impact factor: 7.446

Review 8.  Systems protobiology: origin of life in lipid catalytic networks.

Authors:  Doron Lancet; Raphael Zidovetzki; Omer Markovitch
Journal:  J R Soc Interface       Date:  2018-07       Impact factor: 4.118

9.  The improved efficacy of Sifuvirtide compared with enfuvirtide might be related to its selectivity for the rigid biomembrane, as determined through surface plasmon resonance.

Authors:  Ping Cao; Guifang Dou; Yuanguo Cheng; Jinjing Che
Journal:  PLoS One       Date:  2017-02-16       Impact factor: 3.240

10.  Conjugation of cholesterol to HIV-1 fusion inhibitor C34 increases peptide-membrane interactions potentiating its action.

Authors:  Axel Hollmann; Pedro M Matos; Marcelo T Augusto; Miguel A R B Castanho; Nuno C Santos
Journal:  PLoS One       Date:  2013-04-02       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.