Literature DB >> 15489283

The Cell Wall Navigator database. A systems-based approach to organism-unrestricted mining of protein families involved in cell wall metabolism.

Thomas Girke1, Josh Lauricha, Hua Tran, Kenneth Keegstra, Natasha Raikhel.   

Abstract

Mesh:

Substances:

Year:  2004        PMID: 15489283      PMCID: PMC523362          DOI: 10.1104/pp.104.049965

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


× No keyword cloud information.
  17 in total

1.  Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.

Authors:  M Ashburner; C A Ball; J A Blake; D Botstein; H Butler; J M Cherry; A P Davis; K Dolinski; S S Dwight; J T Eppig; M A Harris; D P Hill; L Issel-Tarver; A Kasarskis; S Lewis; J C Matese; J E Richardson; M Ringwald; G M Rubin; G Sherlock
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

2.  SYSTERS, GeneNest, SpliceNest: exploring sequence space from genome to protein.

Authors:  Antje Krause; Stefan A Haas; Eivind Coward; Martin Vingron
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

Review 3.  Microarray data quality analysis: lessons from the AFGC project. Arabidopsis Functional Genomics Consortium.

Authors:  David Finkelstein; Rob Ewing; Jeremy Gollub; Fredrik Sterky; J Michael Cherry; Shauna Somerville
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

Review 4.  Biosynthesis and properties of the plant cell wall.

Authors:  Wolf Dieter Reiter
Journal:  Curr Opin Plant Biol       Date:  2002-12       Impact factor: 7.834

5.  The PlantsP and PlantsT Functional Genomics Databases.

Authors:  Jason H Tchieu; Fariba Fana; J Lynn Fink; Jeffrey Harper; T Murlidharan Nair; R Hannes Niedner; Douglas W Smith; Kenneth Steube; Tobey M Tam; Stella Veretnik; Degeng Wang; Michael Gribskov
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

6.  The Bioperl toolkit: Perl modules for the life sciences.

Authors:  Jason E Stajich; David Block; Kris Boulez; Steven E Brenner; Stephen A Chervitz; Chris Dagdigian; Georg Fuellen; James G R Gilbert; Ian Korf; Hilmar Lapp; Heikki Lehväslaiho; Chad Matsalla; Chris J Mungall; Brian I Osborne; Matthew R Pocock; Peter Schattner; Martin Senger; Lincoln D Stein; Elia Stupka; Mark D Wilkinson; Ewan Birney
Journal:  Genome Res       Date:  2002-10       Impact factor: 9.043

7.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

8.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

9.  ARAMEMNON, a novel database for Arabidopsis integral membrane proteins.

Authors:  Rainer Schwacke; Anja Schneider; Eric van der Graaff; Karsten Fischer; Elisabetta Catoni; Marcelo Desimone; Wolf B Frommer; Ulf-Ingo Flügge; Reinhard Kunze
Journal:  Plant Physiol       Date:  2003-01       Impact factor: 8.340

10.  AraCyc: a biochemical pathway database for Arabidopsis.

Authors:  Lukas A Mueller; Peifen Zhang; Seung Y Rhee
Journal:  Plant Physiol       Date:  2003-06       Impact factor: 8.340

View more
  37 in total

1.  ChemMine. A compound mining database for chemical genomics.

Authors:  Thomas Girke; Li-Chang Cheng; Natasha Raikhel
Journal:  Plant Physiol       Date:  2005-06       Impact factor: 8.340

2.  Association genetics of wood physical traits in the conifer white spruce and relationships with gene expression.

Authors:  Jean Beaulieu; Trevor Doerksen; Brian Boyle; Sébastien Clément; Marie Deslauriers; Stéphanie Beauseigle; Sylvie Blais; Pier-Luc Poulin; Patrick Lenz; Sébastien Caron; Philippe Rigault; Paul Bicho; Jean Bousquet; John Mackay
Journal:  Genetics       Date:  2011-03-08       Impact factor: 4.562

3.  The Dynamics of Transcript Abundance during Cellularization of Developing Barley Endosperm.

Authors:  Runxuan Zhang; Matthew R Tucker; Rachel A Burton; Neil J Shirley; Alan Little; Jenny Morris; Linda Milne; Kelly Houston; Pete E Hedley; Robbie Waugh; Geoffrey B Fincher
Journal:  Plant Physiol       Date:  2016-01-11       Impact factor: 8.340

4.  Genome cluster database. A sequence family analysis platform for Arabidopsis and rice.

Authors:  Kevin Horan; Josh Lauricha; Julia Bailey-Serres; Natasha Raikhel; Thomas Girke
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

5.  Ultrastructure and composition of the Nannochloropsis gaditana cell wall.

Authors:  Matthew J Scholz; Taylor L Weiss; Robert E Jinkerson; Jia Jing; Robyn Roth; Ursula Goodenough; Matthew C Posewitz; Henri G Gerken
Journal:  Eukaryot Cell       Date:  2014-09-19

6.  Morpho-physiological and transcriptome profiling reveal novel zinc deficiency-responsive genes in rice.

Authors:  Tirthankar Bandyopadhyay; Poonam Mehra; Suboot Hairat; Jitender Giri
Journal:  Funct Integr Genomics       Date:  2017-03-14       Impact factor: 3.410

7.  Arabidopsis reversibly glycosylated polypeptides 1 and 2 are essential for pollen development.

Authors:  Georgia Drakakaki; Olga Zabotina; Ivan Delgado; Stéphanie Robert; Kenneth Keegstra; Natasha Raikhel
Journal:  Plant Physiol       Date:  2006-10-27       Impact factor: 8.340

8.  Annotating genes of known and unknown function by large-scale coexpression analysis.

Authors:  Kevin Horan; Charles Jang; Julia Bailey-Serres; Ron Mittler; Christian Shelton; Jeff F Harper; Jian-Kang Zhu; John C Cushman; Martin Gollery; Thomas Girke
Journal:  Plant Physiol       Date:  2008-03-19       Impact factor: 8.340

9.  Genetic resources for maize cell wall biology.

Authors:  Bryan W Penning; Charles T Hunter; Reuben Tayengwa; Andrea L Eveland; Christopher K Dugard; Anna T Olek; Wilfred Vermerris; Karen E Koch; Donald R McCarty; Mark F Davis; Steven R Thomas; Maureen C McCann; Nicholas C Carpita
Journal:  Plant Physiol       Date:  2009-11-19       Impact factor: 8.340

10.  Proteomics of plasma membranes from poplar trees reveals tissue distribution of transporters, receptors, and proteins in cell wall formation.

Authors:  Robert Nilsson; Katja Bernfur; Niklas Gustavsson; Joakim Bygdell; Gunnar Wingsle; Christer Larsson
Journal:  Mol Cell Proteomics       Date:  2009-11-28       Impact factor: 5.911

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.