Literature DB >> 15477393

Mitochondrial tRNA 3' end metabolism and human disease.

Louis Levinger1, Mario Mörl, Catherine Florentz.   

Abstract

Over 150 mutations in the mitochondrial genome have been shown to be associated with human disease. Remarkably, two-thirds of them are found in tRNA genes, which constitute only one-tenth of the mitochondrial genome. A total of 22 tRNAs punctuate the genome and are produced together with 11 mRNAs and 2 rRNAs from long polycistronic primary transcripts with almost no spacers. Pre-tRNAs thus require precise endonucleolytic excision. Furthermore, the CCA triplet which forms the 3' end of all tRNAs is not encoded, but must be synthesized by the CCA-adding enzyme after 3' end cleavage. Amino acid attachment to the CCA of mature tRNA is performed by aminoacyl-tRNA synthetases, which, like the preceding processing enzymes, are nuclear-encoded and imported into mitochondria. Here, we critically review the effectiveness and reliability of evidence obtained from reactions with in vitro transcripts that pathogenesis-associated mutant mitochondrial tRNAs can lead to deficiencies in tRNA 3' end metabolism (3' end cleavage, CCA addition and aminoacylation) toward an understanding of molecular mechanisms underlying human tRNA disorders. These defects probably contribute, individually and cumulatively, to the progression of human mitochondrial diseases.

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Year:  2004        PMID: 15477393      PMCID: PMC524294          DOI: 10.1093/nar/gkh884

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  93 in total

1.  Decreased CCA-addition in human mitochondrial tRNAs bearing a pathogenic A4317G or A10044G mutation.

Authors:  Yukihide Tomari; Narumi Hino; Takashi Nagaike; Tsutomu Suzuki; Takuya Ueda
Journal:  J Biol Chem       Date:  2003-03-05       Impact factor: 5.157

2.  The Streptomyces coelicolor polynucleotide phosphorylase homologue, and not the putative poly(A) polymerase, can polyadenylate RNA.

Authors:  Björn Sohlberg; Jianqiang Huang; Stanley N Cohen
Journal:  J Bacteriol       Date:  2003-12       Impact factor: 3.490

Review 3.  Impact of disease-related mitochondrial mutations on tRNA structure and function.

Authors:  Lisa M Wittenhagen; Shana O Kelley
Journal:  Trends Biochem Sci       Date:  2003-11       Impact factor: 13.807

4.  Towards understanding human mitochondrial leucine aminoacylation identity.

Authors:  Bénédicte Sohm; Magali Frugier; Hervé Brulé; Krzysztof Olszak; Anna Przykorska; Catherine Florentz
Journal:  J Mol Biol       Date:  2003-05-16       Impact factor: 5.469

5.  Crystal structure of the human CCA-adding enzyme: insights into template-independent polymerization.

Authors:  Martin A Augustin; Andreas S Reichert; Heike Betat; Robert Huber; Mario Mörl; Clemens Steegborn
Journal:  J Mol Biol       Date:  2003-05-16       Impact factor: 5.469

6.  Interdomain communication between weak structural elements within a disease-related human tRNA.

Authors:  Marc D Roy; Lisa M Wittenhagen; Brian E Vozzella; Shana O Kelley
Journal:  Biochemistry       Date:  2004-01-20       Impact factor: 3.162

Review 7.  Disorders of mitochondrial protein synthesis.

Authors:  Howard T Jacobs
Journal:  Hum Mol Genet       Date:  2003-08-19       Impact factor: 6.150

Review 8.  Human mitochondrial tRNAs in health and disease.

Authors:  C Florentz; B Sohm; P Tryoen-Tóth; J Pütz; M Sissler
Journal:  Cell Mol Life Sci       Date:  2003-07       Impact factor: 9.261

9.  Endonucleolytic processing of CCA-less tRNA precursors by RNase Z in Bacillus subtilis.

Authors:  Olivier Pellegrini; Jamel Nezzar; Anita Marchfelder; Harald Putzer; Ciarán Condon
Journal:  EMBO J       Date:  2003-09-01       Impact factor: 11.598

10.  Drosophila RNase Z processes mitochondrial and nuclear pre-tRNA 3' ends in vivo.

Authors:  Edward B Dubrovsky; Veronica A Dubrovskaya; Louis Levinger; Steffen Schiffer; Anita Marchfelder
Journal:  Nucleic Acids Res       Date:  2004-01-09       Impact factor: 16.971

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  66 in total

1.  Cosegregation of the G7444A mutation in the mitochondrial COI/tRNA(Ser(UCN)) genes with the 12S rRNA A1555G mutation in a Chinese family with aminoglycoside-induced and nonsyndromic hearing loss.

Authors:  Huijun Yuan; Yaping Qian; Yanjun Xu; Juyang Cao; Linna Bai; Weidong Shen; Fei Ji; Xin Zhang; Dongyang Kang; Jun Qin Mo; John H Greinwald; Dongyi Han; Suoqiang Zhai; Wie-Yen Young; Min-Xin Guan
Journal:  Am J Med Genet A       Date:  2005-10-01       Impact factor: 2.802

2.  Polyadenylation and degradation of human mitochondrial RNA: the prokaryotic past leaves its mark.

Authors:  Shimyn Slomovic; David Laufer; Dan Geiger; Gadi Schuster
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

3.  Residues in two homology blocks on the amino side of the tRNase Z His domain contribute unexpectedly to pre-tRNA 3' end processing.

Authors:  Neela Zareen; Angela Hopkinson; Louis Levinger
Journal:  RNA       Date:  2006-04-17       Impact factor: 4.942

4.  Achieving specific RNA cleavage activity by an inactive splicing endonuclease subunit through engineered oligomerization.

Authors:  Kate Calvin; Hong Li
Journal:  J Mol Biol       Date:  2006-11-18       Impact factor: 5.469

5.  Top-down tandem mass spectrometry of tRNA via ion trap collision-induced dissociation.

Authors:  Teng-Yi Huang; Jian Liu; Scott A McLuckey
Journal:  J Am Soc Mass Spectrom       Date:  2009-12-28       Impact factor: 3.109

6.  Distinct Profiles for Mitochondrial t-RNAs and Small Nucleolar RNAs in Locally Invasive and Metastatic Colorectal Cancer.

Authors:  Lai Xu; Joseph Ziegelbauer; Rong Wang; Wells W Wu; Rong-Fong Shen; Hartmut Juhl; Yaqin Zhang; Amy Rosenberg
Journal:  Clin Cancer Res       Date:  2015-09-18       Impact factor: 12.531

Review 7.  When a common biological role does not imply common disease outcomes: Disparate pathology linked to human mitochondrial aminoacyl-tRNA synthetases.

Authors:  Ligia Elena González-Serrano; Joseph W Chihade; Marie Sissler
Journal:  J Biol Chem       Date:  2019-01-15       Impact factor: 5.157

8.  Pathogenic mechanism of a human mitochondrial tRNAPhe mutation associated with myoclonic epilepsy with ragged red fibers syndrome.

Authors:  Jiqiang Ling; Hervé Roy; Daoming Qin; Mary Anne T Rubio; Juan D Alfonzo; Kurt Fredrick; Michael Ibba
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-18       Impact factor: 11.205

9.  Template-dependent 3'-5' nucleotide addition is a shared feature of tRNAHis guanylyltransferase enzymes from multiple domains of life.

Authors:  Maria G Abad; Bhalchandra S Rao; Jane E Jackman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-18       Impact factor: 11.205

10.  Improved tRNA prediction in the American house dust mite reveals widespread occurrence of extremely short minimal tRNAs in acariform mites.

Authors:  Pavel B Klimov; Barry M Oconnor
Journal:  BMC Genomics       Date:  2009-12-11       Impact factor: 3.969

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