Literature DB >> 14715923

Drosophila RNase Z processes mitochondrial and nuclear pre-tRNA 3' ends in vivo.

Edward B Dubrovsky1, Veronica A Dubrovskaya, Louis Levinger, Steffen Schiffer, Anita Marchfelder.   

Abstract

Although correct tRNA 3' ends are crucial for protein biosynthesis, generation of mature tRNA 3' ends in eukaryotes is poorly understood and has so far only been investigated in vitro. We report here for the first time that eukaryotic tRNA 3' end maturation is catalysed by the endonuclease RNase Z in vivo. Silencing of the JhI-1 gene (RNase Z homolog) in vivo with RNAi in Drosophila S2 cultured cells causes accumulation of nuclear and mitochondrial pre-tRNAs, suggesting that JhI-1 encodes both forms of the tRNA 3' endonuclease RNase Z, and establishing its biological role in endonucleolytic tRNA 3' end processing. In addition our data show that in vivo 5' processing of nuclear and mitochondrial pre-tRNAs occurs before 3' processing.

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Year:  2004        PMID: 14715923      PMCID: PMC373292          DOI: 10.1093/nar/gkh182

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  44 in total

Review 1.  Animal mitochondrial genomes.

Authors:  J L Boore
Journal:  Nucleic Acids Res       Date:  1999-04-15       Impact factor: 16.971

Review 2.  Two birds with one stone: genes that encode products targeted to two or more compartments.

Authors:  I Small; H Wintz; K Akashi; H Mireau
Journal:  Plant Mol Biol       Date:  1998-09       Impact factor: 4.076

Review 3.  Ribonuclease P: unity and diversity in a tRNA processing ribozyme.

Authors:  D N Frank; N R Pace
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

4.  5' end maturation and RNA editing have to precede tRNA 3' processing in plant mitochondria.

Authors:  A Kunzmann; A Brennicke; A Marchfelder
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-06       Impact factor: 11.205

5.  Processing of precursor tRNAs in Drosophila. Processing of the 3' end involves an endonucleolytic cleavage and occurs after 5' end maturation.

Authors:  D Frendewey; T Dingermann; L Cooley; D Söll
Journal:  J Biol Chem       Date:  1985-01-10       Impact factor: 5.157

6.  Purification and characterization of the precursor tRNA 3'-end processing nuclease from Aspergillus nidulans.

Authors:  S J Han; H S Kang
Journal:  Biochem Biophys Res Commun       Date:  1997-04-17       Impact factor: 3.575

7.  Nucleolytic processing of a tRNAArg-tRNAAsp dimeric precursor by a homologous component from Saccharomyces cerevisiae.

Authors:  D R Engelke; P Gegenheimer; J Abelson
Journal:  J Biol Chem       Date:  1985-01-25       Impact factor: 5.157

8.  The yeast La protein is required for the 3' endonucleolytic cleavage that matures tRNA precursors.

Authors:  C J Yoo; S L Wolin
Journal:  Cell       Date:  1997-05-02       Impact factor: 41.582

9.  Pre-tRNA 3'-processing in Saccharomyces cerevisiae. Purification and characterization of exo- and endoribonucleases.

Authors:  A Papadimitriou; H J Gross
Journal:  Eur J Biochem       Date:  1996-12-15

10.  The 3' end CCA of mature tRNA is an antideterminant for eukaryotic 3'-tRNase.

Authors:  A Mohan; S Whyte; X Wang; M Nashimoto; L Levinger
Journal:  RNA       Date:  1999-02       Impact factor: 4.942

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  56 in total

1.  A novel 4-base-recognizing RNA cutter that can remove the single 3' terminal nucleotides from RNA molecules.

Authors:  Hiroaki Takaku; Asako Minagawa; Masamichi Takagi; Masayuki Nashimoto
Journal:  Nucleic Acids Res       Date:  2004-06-28       Impact factor: 16.971

2.  The N-terminal half-domain of the long form of tRNase Z is required for the RNase 65 activity.

Authors:  Hiroaki Takaku; Asako Minagawa; Masamichi Takagi; Masayuki Nashimoto
Journal:  Nucleic Acids Res       Date:  2004-08-18       Impact factor: 16.971

Review 3.  Mitochondrial tRNA 3' end metabolism and human disease.

Authors:  Louis Levinger; Mario Mörl; Catherine Florentz
Journal:  Nucleic Acids Res       Date:  2004-10-11       Impact factor: 16.971

Review 4.  tRNA biology charges to the front.

Authors:  Eric M Phizicky; Anita K Hopper
Journal:  Genes Dev       Date:  2010-09-01       Impact factor: 11.361

5.  Human mitochondrial transcription revisited: only TFAM and TFB2M are required for transcription of the mitochondrial genes in vitro.

Authors:  Dmitry Litonin; Marina Sologub; Yonghong Shi; Maria Savkina; Michael Anikin; Maria Falkenberg; Claes M Gustafsson; Dmitry Temiakov
Journal:  J Biol Chem       Date:  2010-04-21       Impact factor: 5.157

6.  The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes.

Authors:  Ryohei Ishii; Asako Minagawa; Hiroaki Takaku; Masamichi Takagi; Masayuki Nashimoto; Shigeyuki Yokoyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-07-21

7.  Residues in two homology blocks on the amino side of the tRNase Z His domain contribute unexpectedly to pre-tRNA 3' end processing.

Authors:  Neela Zareen; Angela Hopkinson; Louis Levinger
Journal:  RNA       Date:  2006-04-17       Impact factor: 4.942

8.  Structure and function of eukaryotic Ribonuclease P RNA.

Authors:  Steven M Marquez; Julian L Chen; Donald Evans; Norman R Pace
Journal:  Mol Cell       Date:  2006-11-03       Impact factor: 17.970

9.  Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation.

Authors:  Laura A Copela; Cesar F Fernandez; R Lynn Sherrer; Sandra L Wolin
Journal:  RNA       Date:  2008-05-02       Impact factor: 4.942

10.  Zinc- and iron-dependent cytosolic metallo-beta-lactamase domain proteins exhibit similar zinc-binding affinities, independent of an atypical glutamate at the metal-binding site.

Authors:  Oliver Schilling; Andreas Vogel; Brenda Kostelecky; Hugo Natal da Luz; Daniel Spemann; Bettina Späth; Anita Marchfelder; Wolfgang Tröger; Wolfram Meyer-Klaucke
Journal:  Biochem J       Date:  2005-01-01       Impact factor: 3.857

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