Literature DB >> 15458636

A novel structure of DNA repair protein RecO from Deinococcus radiodurans.

Nodar Makharashvili1, Olga Koroleva, Sibes Bera, Duane P Grandgenett, Sergey Korolev.   

Abstract

Recovery of arrested replication requires coordinated action of DNA repair, replication, and recombination machineries. Bacterial RecO protein is a member of RecF recombination repair pathway important for replication recovery. RecO possesses two distinct activities in vitro, closely resembling those of eukaryotic protein Rad52: DNA annealing and RecA-mediated DNA recombination. Here we present the crystal structure of the RecO protein from the extremely radiation resistant bacteria Deinococcus radiodurans (DrRecO) and characterize its DNA binding and strand annealing properties. The RecO structure is totally different from the Rad52 structure. DrRecO is comprised of three structural domains: an N-terminal domain which adopts an OB-fold, a novel alpha-helical domain, and an unusual zinc-binding domain. Sequence alignments suggest that the multidomain architecture is conserved between RecO proteins from other bacterial species and is suitable to elucidate sites of protein-protein and DNA-protein interactions necessary for RecO functions during the replication recovery and DNA repair. Copyright 2004 Elsevier Ltd.

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Year:  2004        PMID: 15458636     DOI: 10.1016/j.str.2004.08.006

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  25 in total

1.  OB-fold domain of KREPA4 mediates high-affinity interaction with guide RNA and possesses annealing activity.

Authors:  Smriti Kala; Reza Salavati
Journal:  RNA       Date:  2010-08-16       Impact factor: 4.942

2.  A mechanism for single-stranded DNA-binding protein (SSB) displacement from single-stranded DNA upon SSB-RecO interaction.

Authors:  Jin Inoue; Takayuki Nagae; Masaki Mishima; Yutaka Ito; Takehiko Shibata; Tsutomu Mikawa
Journal:  J Biol Chem       Date:  2010-12-17       Impact factor: 5.157

3.  Allosteric effects of SSB C-terminal tail on assembly of E. coli RecOR proteins.

Authors:  Min Kyung Shinn; Alexander G Kozlov; Timothy M Lohman
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

4.  Structural conservation of RecF and Rad50: implications for DNA recognition and RecF function.

Authors:  Olga Koroleva; Nodar Makharashvili; Charmain T Courcelle; Justin Courcelle; Sergey Korolev
Journal:  EMBO J       Date:  2007-01-25       Impact factor: 11.598

5.  Crystal structure and mutational study of RecOR provide insight into its mode of DNA binding.

Authors:  Joanna Timmins; Ingar Leiros; Sean McSweeney
Journal:  EMBO J       Date:  2007-06-21       Impact factor: 11.598

6.  RecO is essential for DNA damage repair in Deinococcus radiodurans.

Authors:  Guangzhi Xu; Liangyan Wang; Huan Chen; Huiming Lu; Nanjiao Ying; Bing Tian; Yuejin Hua
Journal:  J Bacteriol       Date:  2008-01-25       Impact factor: 3.490

Review 7.  SSB as an organizer/mobilizer of genome maintenance complexes.

Authors:  Robert D Shereda; Alexander G Kozlov; Timothy M Lohman; Michael M Cox; James L Keck
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 Sep-Oct       Impact factor: 8.250

8.  Bacillus subtilis RecO nucleates RecA onto SsbA-coated single-stranded DNA.

Authors:  Candela Manfredi; Begoña Carrasco; Silvia Ayora; Juan C Alonso
Journal:  J Biol Chem       Date:  2008-07-03       Impact factor: 5.157

9.  RecO-mediated DNA homology search and annealing is facilitated by SsbA.

Authors:  Candela Manfredi; Yuki Suzuki; Tribhuwan Yadav; Kunio Takeyasu; Juan C Alonso
Journal:  Nucleic Acids Res       Date:  2010-06-25       Impact factor: 16.971

10.  Rising from the Ashes: DNA Repair in Deinococcus radiodurans.

Authors:  Michael M Cox; James L Keck; John R Battista
Journal:  PLoS Genet       Date:  2010-01-15       Impact factor: 5.917

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