Literature DB >> 15454566

Functional analysis of Drosophila melanogaster gene regulatory sequences by transgene coplacement.

John Parsch1.   

Abstract

The function of putative regulatory sequences identified by comparative genomics can be elucidated only through experimentation. Here the effectiveness of using heterologous gene constructs and transgene coplacement to characterize regulatory sequence function is demonstrated. This method shows that a sequence in the Adh 3'-untranslated region negatively regulates expression, independent of gene or chromosomal context.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15454566      PMCID: PMC1448109          DOI: 10.1534/genetics.104.028498

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  18 in total

1.  Gene targeting by homologous recombination in Drosophila.

Authors:  Y S Rong; K G Golic
Journal:  Science       Date:  2000-06-16       Impact factor: 47.728

2.  Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs.

Authors:  J E Butler; J T Kadonaga
Journal:  Genes Dev       Date:  2001-10-01       Impact factor: 11.361

3.  An experimental test for lineage-specific position effects on alcohol dehydrogenase (Adh) genes in Drosophila.

Authors:  M L Siegal; D L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

4.  Transgene Coplacement and high efficiency site-specific recombination with the Cre/loxP system in Drosophila.

Authors:  M L Siegal; D L Hartl
Journal:  Genetics       Date:  1996-10       Impact factor: 4.562

5.  Deletion of a conserved regulatory element in the Drosophila Adh gene leads to increased alcohol dehydrogenase activity but also delays development.

Authors:  J Parsch; J A Russell; I Beerman; D L Hartl; W Stephan
Journal:  Genetics       Date:  2000-09       Impact factor: 4.562

6.  Site-directed mutations reveal long-range compensatory interactions in the Adh gene of Drosophila melanogaster.

Authors:  J Parsch; S Tanda; W Stephan
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-04       Impact factor: 11.205

7.  Nucleotide polymorphism at the alcohol dehydrogenase locus of Drosophila melanogaster.

Authors:  M Kreitman
Journal:  Nature       Date:  1983 Aug 4-10       Impact factor: 49.962

8.  Use of P-element-mediated transformation to identify the molecular basis of naturally occurring variants affecting Adh expression in Drosophila melanogaster.

Authors:  C C Laurie-Ahlberg; L F Stam
Journal:  Genetics       Date:  1987-01       Impact factor: 4.562

9.  The effect of an intronic polymorphism on alcohol dehydrogenase expression in Drosophila melanogaster.

Authors:  C C Laurie; L F Stam
Journal:  Genetics       Date:  1994-10       Impact factor: 4.562

10.  A highly conserved sequence in the 3'-untranslated region of the drosophila Adh gene plays a functional role in Adh expression.

Authors:  J Parsch; W Stephan; S Tanda
Journal:  Genetics       Date:  1999-02       Impact factor: 4.562

View more
  5 in total

1.  Identification of cis-regulatory sequences in the human angiotensinogen gene by transgene coplacement and site-specific recombination.

Authors:  Taku Shimizu; Takayuki Oishi; Akane Omori; Akiko Sugiura; Keiko Hirota; Hisanori Aoyama; Tomoko Saito; Takeshi Sugaya; Yasuhiro Kon; James Douglas Engel; Akiyoshi Fukamizu; Keiji Tanimoto
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

2.  Experimentally increased codon bias in the Drosophila Adh gene leads to an increase in larval, but not adult, alcohol dehydrogenase activity.

Authors:  Winfried Hense; Nathan Anderson; Stephan Hutter; Wolfgang Stephan; John Parsch; David B Carlini
Journal:  Genetics       Date:  2009-12-04       Impact factor: 4.562

3.  Patterns of DNA-sequence divergence between Drosophila miranda and D. pseudoobscura.

Authors:  Sophie Marion de Procé; Daniel L Halligan; Peter D Keightley; Brian Charlesworth
Journal:  J Mol Evol       Date:  2009-10-27       Impact factor: 2.395

4.  Regulation of the X Chromosome in the Germline and Soma of Drosophila melanogaster Males.

Authors:  Eliza Argyridou; John Parsch
Journal:  Genes (Basel)       Date:  2018-05-04       Impact factor: 4.096

5.  The Influence of Chromosomal Environment on X-Linked Gene Expression in Drosophila melanogaster.

Authors:  Aleksei Belyi; Eliza Argyridou; John Parsch
Journal:  Genome Biol Evol       Date:  2020-12-06       Impact factor: 3.416

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.