Literature DB >> 15453763

Accelerated color change of gold nanoparticles assembled by DNAzymes for simple and fast colorimetric Pb2+ detection.

Juewen Liu1, Yi Lu.   

Abstract

The combination of high metal selectivity of DNAzymes with the strong distance-dependent optical properties of metallic nanoparticles has presented considerable opportunities for designing colorimetric sensors for metal ions. We previously communicated a design for a colorimetric lead sensor based on the assembly of gold nanoparticles by a Pb(2+)-dependent DNAzyme. However, heating to 50 degrees C followed by a cooling process of approximately 2 h was required to observe the color change. Herein we report a new improved design that allows fast (<10 min) detection of Pb(2+) at ambient temperature. This improvement of sensor performance is a result of detailed studies of the DNAzyme and nanoparticles, which identified "tail-to-tail" nanoparticle alignment, and large (42 nm diameter) nanoparticle size as the major determining factors in allowing fast color changes. The optimal conditions for other factors such as temperature (35 degrees C) and concentrations of the DNAzyme (2 microM), its substrate (3 nM), and NaCl (300 mM) have also been determined. These results demonstrate that fundamental understanding of the DNAzyme biochemistry and nanoparticle science can lead to dramatically improved colorimetric sensors.

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Year:  2004        PMID: 15453763     DOI: 10.1021/ja046628h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  60 in total

Review 1.  Gold nanoparticles in chemical and biological sensing.

Authors:  Krishnendu Saha; Sarit S Agasti; Chaekyu Kim; Xiaoning Li; Vincent M Rotello
Journal:  Chem Rev       Date:  2012-02-02       Impact factor: 60.622

2.  Colorimetric detection of DNA, small molecules, proteins, and ions using unmodified gold nanoparticles and conjugated polyelectrolytes.

Authors:  Fan Xia; Xiaolei Zuo; Renqiang Yang; Yi Xiao; Di Kang; Alexis Vallée-Bélisle; Xiong Gong; Jonathan D Yuen; Ben B Y Hsu; Alan J Heeger; Kevin W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

3.  Nano-flares: probes for transfection and mRNA detection in living cells.

Authors:  Dwight S Seferos; David A Giljohann; Haley D Hill; Andrew E Prigodich; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2007-11-23       Impact factor: 15.419

Review 4.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

5.  Coarse-Grained Brownian Dynamics Simulations of the 10-23 DNAzyme.

Authors:  Martin Kenward; Kevin D Dorfman
Journal:  Biophys J       Date:  2009-11-18       Impact factor: 4.033

6.  A gold nanoparticle-based colorimetric mercury(II) biosensor using a DNA probe with phosphorothioate RNA modification and exonuclease III-assisted signal amplification.

Authors:  Yunpeng Xing; Qian Zhu; Xiaohong Zhou; Peishi Qi
Journal:  Mikrochim Acta       Date:  2020-03-11       Impact factor: 5.833

Review 7.  RNA-extraction-free nano-amplified colorimetric test for point-of-care clinical diagnosis of COVID-19.

Authors:  Maha Alafeef; Parikshit Moitra; Ketan Dighe; Dipanjan Pan
Journal:  Nat Protoc       Date:  2021-04-30       Impact factor: 13.491

Review 8.  Metal ion sensors based on DNAzymes and related DNA molecules.

Authors:  Xiao-Bing Zhang; Rong-Mei Kong; Yi Lu
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2011       Impact factor: 10.745

9.  Gene regulation with polyvalent siRNA-nanoparticle conjugates.

Authors:  David A Giljohann; Dwight S Seferos; Andrew E Prigodich; Pinal C Patel; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2009-02-18       Impact factor: 15.419

10.  A highly sensitive DNAzyme-based SERS biosensor for quantitative detection of lead ions in human serum.

Authors:  Wei Xu; Aiwu Zhao; Fangtao Zuo; Ranjha Khan; Hafiz Muhammad Jafar Hussain; Jian Li
Journal:  Anal Bioanal Chem       Date:  2020-05-29       Impact factor: 4.142

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