Literature DB >> 15451504

Metagenomics--the key to the uncultured microbes.

Wolfgang R Streit1, Ruth A Schmitz.   

Abstract

It is widely accepted that up to 99.8% of the microbes present in many environments are not readily culturable. 'Metagenome technology' tries to overcome this bottleneck by developing and using culture-independent approaches. From the outset, metagenome-based approaches have led to the accumulation of an increasing number of DNA sequences, but until this time the sequences retrieved have been those of uncultured microbes. These genomic sequences are currently exploited for novel biotechnological and pharmaceutical applications and to increase our knowledge on microbial ecology and physiology of these microbes. Using the metagenome sequences to fully understand how complex microbial communities function and how microbes interact within these niches represents a major challenge for microbiologists today.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15451504     DOI: 10.1016/j.mib.2004.08.002

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  84 in total

1.  Identification and characterization of a novel cold-adapted esterase from a metagenomic library of mountain soil.

Authors:  Kyong-Cheol Ko; Soon-Ok Rim; Yunjon Han; Bong Seok Shin; Geun-Joong Kim; Jong Hyun Choi; Jae Jun Song
Journal:  J Ind Microbiol Biotechnol       Date:  2012-01-24       Impact factor: 3.346

2.  Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes.

Authors:  Jiarong Guo; James R Cole; Qingpeng Zhang; C Titus Brown; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2015-10-16       Impact factor: 4.792

3.  Purification, crystallization and preliminary crystallographic analysis of Est-Y29: a novel oligomeric beta-lactamase.

Authors:  Seungbum Kim; Sangbum Joo; Sangyoung Yoon; Sungsoo Kim; Jongkook Moon; Yeonwoo Ryu; Kyeong Kyu Kim; T Doohun Kim
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-02-26

4.  Evaluating techniques for metagenome annotation using simulated sequence data.

Authors:  Richard J Randle-Boggis; Thorunn Helgason; Melanie Sapp; Peter D Ashton
Journal:  FEMS Microbiol Ecol       Date:  2016-05-08       Impact factor: 4.194

5.  Isolation and characterization of a family VII esterase derived from alluvial soil metagenomic library.

Authors:  Weixin Tao; Myung Hwan Lee; Jing Wu; Nam Hee Kim; Seon-Woo Lee
Journal:  J Microbiol       Date:  2011-05-03       Impact factor: 3.422

Review 6.  New extremophilic lipases and esterases from metagenomics.

Authors:  Olalla López-López; Maria E Cerdán; Maria I González Siso
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

7.  Characterization and its potential application of two esterases derived from the arctic sediment metagenome.

Authors:  Jeong Ho Jeon; Jun-Tae Kim; Sung Gyun Kang; Jung-Hyun Lee; Sang-Jin Kim
Journal:  Mar Biotechnol (NY)       Date:  2008-09-24       Impact factor: 3.619

8.  In silico characterization of the global Geobacillus and Parageobacillus secretome.

Authors:  Pedro H Lebre; Habibu Aliyu; Pieter De Maayer; Don A Cowan
Journal:  Microb Cell Fact       Date:  2018-10-03       Impact factor: 5.328

9.  Computational approaches to natural product discovery.

Authors:  Marnix H Medema; Michael A Fischbach
Journal:  Nat Chem Biol       Date:  2015-09       Impact factor: 15.040

10.  Phylogenetic screening of a bacterial, metagenomic library using homing endonuclease restriction and marker insertion.

Authors:  Pui Yi Yung; Catherine Burke; Matt Lewis; Suhelen Egan; Staffan Kjelleberg; Torsten Thomas
Journal:  Nucleic Acids Res       Date:  2009-11       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.