Literature DB >> 15388921

Acidophilic adaptations in the structure of Acetobacter aceti N5-carboxyaminoimidazole ribonucleotide mutase (PurE).

Ethan C Settembre1, Johnathan R Chittuluru, Christopher P Mill, T Joseph Kappock, Steven E Ealick.   

Abstract

The crystal structure of Acetobacter aceti PurE was determined to a resolution of 1.55 A and is compared with the known structures of the class I PurEs from a mesophile, Escherichia coli, and a thermophile, Thermotoga maritima. Analyses of the general factors that increase protein stability are examined as potential explanations for the acid stability of A. aceti PurE. Increased inter-subunit hydrogen bonding and an increased number of arginine-containing salt bridges appear to account for the bulk of the increased acid stability. A chain of histidines linking two active sites is discussed in the context of the proton transfers catalyzed by the enzyme.

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Year:  2004        PMID: 15388921     DOI: 10.1107/S090744490401858X

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  10 in total

1.  Formyl-coenzyme A (CoA):oxalate CoA-transferase from the acidophile Acetobacter aceti has a distinctive electrostatic surface and inherent acid stability.

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3.  Structural and biochemical characterization of N5-carboxyaminoimidazole ribonucleotide synthetase and N5-carboxyaminoimidazole ribonucleotide mutase from Staphylococcus aureus.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-07-12

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Authors:  Aaron A Hoskins; Mariya Morar; T Joseph Kappock; Irimpan I Mathews; Judith B Zaugg; Timothy E Barder; Paul Peng; Akimitsu Okamoto; Steven E Ealick; JoAnne Stubbe
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Review 5.  Structural and functional adaptation in extremophilic microbial α-amylases.

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Journal:  Biophys Rev       Date:  2022-01-24

6.  Multiple active site histidine protonation states in Acetobacter aceti N5-carboxyaminoimidazole ribonucleotide mutase detected by REDOR NMR.

Authors:  Jacob Schaefer; Hong Jiang; Aaron E Ransome; T Joseph Kappock
Journal:  Biochemistry       Date:  2007-07-27       Impact factor: 3.162

Review 7.  Structural biology of the purine biosynthetic pathway.

Authors:  Y Zhang; M Morar; S E Ealick
Journal:  Cell Mol Life Sci       Date:  2008-11       Impact factor: 9.261

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9.  Leucine-Responsive Regulatory Protein in Acetic Acid Bacteria Is Stable and Functions at a Wide Range of Intracellular pH Levels.

Authors:  Yuri Ishii; Yuki Shige; Naoki Akasaka; Afi Candra Trinugraha; Haruka Higashikubo; Wakao Fukuda; Shinsuke Fujiwara
Journal:  J Bacteriol       Date:  2021-08-20       Impact factor: 3.490

10.  AcalPred: a sequence-based tool for discriminating between acidic and alkaline enzymes.

Authors:  Hao Lin; Wei Chen; Hui Ding
Journal:  PLoS One       Date:  2013-10-09       Impact factor: 3.240

  10 in total

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