Literature DB >> 15373803

AnoXcel: an Anopheles gambiae protein database.

J M C Ribeiro1, P Topalis, C Louis.   

Abstract

The proteome of the mosquito Anopheles gambiae was organized on a hyperlinked spreadsheet format containing one protein per row and several pieces of information in each column. The information for each protein ranges from the presence or absence of signal peptide indicative of secretion, presence of transmembrane domains, similarities to several databases, chromosomal location, and relatedness to other An. gambiae proteins, etc. Hosted by AnoBase (http://www.anobase.org/), the whole spreadsheet or segments of it can be downloaded or searched from http://www.anobase.org/AnoBase/Genes/Ano-Xcel by the scientist dealing with the annotation of proteome subsets such as those deriving from transcriptomes, nucleotide microarrays or high throughput mass spectrometry data.

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Year:  2004        PMID: 15373803     DOI: 10.1111/j.0962-1075.2004.00503.x

Source DB:  PubMed          Journal:  Insect Mol Biol        ISSN: 0962-1075            Impact factor:   3.585


  28 in total

1.  Comparative genomics of insect juvenile hormone biosynthesis.

Authors:  F G Noriega; J M C Ribeiro; J F Koener; J G Valenzuela; S Hernandez-Martinez; V M Pham; R Feyereisen
Journal:  Insect Biochem Mol Biol       Date:  2006-01-19       Impact factor: 4.714

Review 2.  Genomic resources for invertebrate vectors of human pathogens, and the role of VectorBase.

Authors:  K Megy; M Hammond; D Lawson; R V Bruggner; E Birney; F H Collins
Journal:  Infect Genet Evol       Date:  2008-01-03       Impact factor: 3.342

3.  Anopheles gambiae genome reannotation through synthesis of ab initio and comparative gene prediction algorithms.

Authors:  Jun Li; Michelle M Riehle; Yan Zhang; Jiannong Xu; Frederick Oduol; Shawn M Gomez; Karin Eiglmeier; Beatrix M Ueberheide; Jeffrey Shabanowitz; Donald F Hunt; José M C Ribeiro; Kenneth D Vernick
Journal:  Genome Biol       Date:  2006-03-27       Impact factor: 13.583

4.  Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection.

Authors:  Rafael D Mesquita; Raquel J Vionette-Amaral; Carl Lowenberger; Rolando Rivera-Pomar; Fernando A Monteiro; Patrick Minx; John Spieth; A Bernardo Carvalho; Francisco Panzera; Daniel Lawson; André Q Torres; Jose M C Ribeiro; Marcos H F Sorgine; Robert M Waterhouse; Michael J Montague; Fernando Abad-Franch; Michele Alves-Bezerra; Laurence R Amaral; Helena M Araujo; Ricardo N Araujo; L Aravind; Georgia C Atella; Patricia Azambuja; Mateus Berni; Paula R Bittencourt-Cunha; Gloria R C Braz; Gustavo Calderón-Fernández; Claudia M A Carareto; Mikkel B Christensen; Igor R Costa; Samara G Costa; Marilvia Dansa; Carlos R O Daumas-Filho; Iron F De-Paula; Felipe A Dias; George Dimopoulos; Scott J Emrich; Natalia Esponda-Behrens; Patricia Fampa; Rita D Fernandez-Medina; Rodrigo N da Fonseca; Marcio Fontenele; Catrina Fronick; Lucinda A Fulton; Ana Caroline Gandara; Eloi S Garcia; Fernando A Genta; Gloria I Giraldo-Calderón; Bruno Gomes; Katia C Gondim; Adriana Granzotto; Alessandra A Guarneri; Roderic Guigó; Myriam Harry; Daniel S T Hughes; Willy Jablonka; Emmanuelle Jacquin-Joly; M Patricia Juárez; Leonardo B Koerich; Angela B Lange; José Manuel Latorre-Estivalis; Andrés Lavore; Gena G Lawrence; Cristiano Lazoski; Claudio R Lazzari; Raphael R Lopes; Marcelo G Lorenzo; Magda D Lugon; David Majerowicz; Paula L Marcet; Marco Mariotti; Hatisaburo Masuda; Karine Megy; Ana C A Melo; Fanis Missirlis; Theo Mota; Fernando G Noriega; Marcela Nouzova; Rodrigo D Nunes; Raquel L L Oliveira; Gilbert Oliveira-Silveira; Sheila Ons; Ian Orchard; Lucia Pagola; Gabriela O Paiva-Silva; Agustina Pascual; Marcio G Pavan; Nicolás Pedrini; Alexandre A Peixoto; Marcos H Pereira; Andrew Pike; Carla Polycarpo; Francisco Prosdocimi; Rodrigo Ribeiro-Rodrigues; Hugh M Robertson; Ana Paula Salerno; Didier Salmon; Didac Santesmasses; Renata Schama; Eloy S Seabra-Junior; Livia Silva-Cardoso; Mario A C Silva-Neto; Matheus Souza-Gomes; Marcos Sterkel; Mabel L Taracena; Marta Tojo; Zhijian Jake Tu; Jose M C Tubio; Raul Ursic-Bedoya; Thiago M Venancio; Ana Beatriz Walter-Nuno; Derek Wilson; Wesley C Warren; Richard K Wilson; Erwin Huebner; Ellen M Dotson; Pedro L Oliveira
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-16       Impact factor: 11.205

5.  AnoEST: toward A. gambiae functional genomics.

Authors:  Evgenia V Kriventseva; Anastasios C Koutsos; Claudia Blass; Fotis C Kafatos; George K Christophides; Evgeny M Zdobnov
Journal:  Genome Res       Date:  2005-05-17       Impact factor: 9.043

6.  Genome-wide patterns of gene expression during aging in the African malaria vector Anopheles gambiae.

Authors:  Mei-Hui Wang; Osvaldo Marinotti; Anthony A James; Edward Walker; John Githure; Guiyun Yan
Journal:  PLoS One       Date:  2010-10-13       Impact factor: 3.240

7.  The tempo and mode of evolution of transposable elements as revealed by molecular phylogenies reconstructed from mosquito genomes.

Authors:  Claudio J Struchiner; Eduardo Massad; Zhijian Tu; José M C Ribeiro
Journal:  Evolution       Date:  2009-07-28       Impact factor: 3.694

8.  The salivary transcriptome of Anopheles gambiae (Diptera: Culicidae) larvae: A microarray-based analysis.

Authors:  M Neira Oviedo; J M C Ribeiro; A Heyland; L VanEkeris; T Moroz; P J Linser
Journal:  Insect Biochem Mol Biol       Date:  2009-03-28       Impact factor: 4.714

Review 9.  The molecular forms of Anopheles gambiae: a phenotypic perspective.

Authors:  Tovi Lehmann; Abdoulaye Diabate
Journal:  Infect Genet Evol       Date:  2008-07-01       Impact factor: 3.342

10.  A draft genome sequence of an invasive mosquito: an Italian Aedes albopictus.

Authors:  Vicky Dritsou; Pantelis Topalis; Nikolai Windbichler; Alekos Simoni; Ann Hall; Daniel Lawson; Malcolm Hinsley; Daniel Hughes; Valerio Napolioni; Francesca Crucianelli; Elena Deligianni; Giuliano Gasperi; Ludvik M Gomulski; Grazia Savini; Mosè Manni; Francesca Scolari; Anna R Malacrida; Bruno Arcà; José M Ribeiro; Fabrizio Lombardo; Giuseppe Saccone; Marco Salvemini; Riccardo Moretti; Giuseppe Aprea; Maurizio Calvitti; Matteo Picciolini; Philippos Aris Papathanos; Roberta Spaccapelo; Guido Favia; Andrea Crisanti; Christos Louis
Journal:  Pathog Glob Health       Date:  2015-09-14       Impact factor: 2.894

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