Literature DB >> 15367136

The power and perils of 'molecular taxonomy': a case study of eyeless and endangered Cicurina (Araneae: Dictynidae) from Texas caves.

P Paquin1, M Hedin.   

Abstract

Rapid development in karst-rich regions of the US state of Texas has prompted the listing of four Cicurina species (Araneae, Dictynidae) as US Federally Endangered. A major constraint in the management of these taxa is the extreme rarity of adult specimens, which are required for accurate species identification. We report a first attempt at using mitochondrial DNA (mtDNA) sequences to accurately identify immature Cicurina specimens. This identification is founded on a phylogenetic framework that is anchored by identified adult and/or topotypic specimens. Analysis of approximately 1 kb of cytochrome oxidase subunit I (CO1) mtDNA data for over 100 samples results in a phylogenetic tree that includes a large number of distinctive, easily recognizable, tip clades. These tip clades almost always correspond to a priori species hypotheses, and show nonoverlapping patterns of sequence divergence, making it possible to place species names on a number of immature specimens. Three cases of inconsistency between recovered tip clades and a priori species hypotheses suggest possible introgression between cave-dwelling Cicurina, or alternatively, species synonymy. Although species determination is not possible in these instances, the inconsistencies point to areas of taxonomic ambiguity that require further study. Our molecular phylogenetic sample is largest for the Federally Endangered C. madla. These data suggest that C. madla occurs in more than twice the number of caves as previously reported, and indicate the possible synonymy of C. madla with C. vespera, which is also Federally Endangered. Network analyses reveal considerable genetic divergence and structuring across caves in this species. Although the use of DNA sequences to identify previously 'unidentifiable' specimens illustrates the potential power of molecular data in taxonomy, many other aspects of the same dataset speak to the necessity of a balanced taxonomic approach.

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Year:  2004        PMID: 15367136     DOI: 10.1111/j.1365-294X.2004.02296.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  22 in total

1.  Obtaining molecular data for all life stages of Typhlodromus (Typhlodromus) exhilaratus (Mesostigmata: Phytoseiidae): consequences for species identification.

Authors:  M Okassa; S Kreiter; M-S Tixier
Journal:  Exp Appl Acarol       Date:  2012-03-29       Impact factor: 2.132

2.  An integrated approach to fast and informative morphological vouchering of nematodes for applications in molecular barcoding.

Authors:  Paul De Ley; Irma Tandingan De Ley; Krystalynne Morris; Eyualem Abebe; Manuel Mundo-Ocampo; Melissa Yoder; Joseph Heras; Dora Waumann; Axayácatl Rocha-Olivares; A H Jay Burr; James G Baldwin; W Kelley Thomas
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

Review 3.  DNA barcodes for biosecurity: invasive species identification.

Authors:  K F Armstrong; S L Ball
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

Review 4.  20 years since the introduction of DNA barcoding: from theory to application.

Authors:  Živa Fišer Pečnikar; Elena V Buzan
Journal:  J Appl Genet       Date:  2013-11-08       Impact factor: 3.240

5.  Life beneath the surface of the central Texan Balcones Escarpment: genus Anillinus Casey, 1918 (Coleoptera, Carabidae, Bembidiini): new species, a key to the Texas species, and notes about their way of life and evolution.

Authors:  Igor M Sokolov; James R Reddell; David H Kavanaugh
Journal:  Zookeys       Date:  2014-06-19       Impact factor: 1.546

Review 6.  Spiders in caves.

Authors:  Stefano Mammola; Marco Isaia
Journal:  Proc Biol Sci       Date:  2017-04-26       Impact factor: 5.349

7.  Catalogue of Texas spiders.

Authors:  David Allen Dean
Journal:  Zookeys       Date:  2016-03-02       Impact factor: 1.546

8.  Phylogenetic investigation of the genus Raoiella (Prostigmata: Tenuipalpidae): diversity, distribution, and world invasions.

Authors:  A P G Dowling; R Ochoa; J J Beard; W C Welbourn; E A Ueckermann
Journal:  Exp Appl Acarol       Date:  2011-09-13       Impact factor: 2.132

9.  Molecular species identification of Central European ground beetles (Coleoptera: Carabidae) using nuclear rDNA expansion segments and DNA barcodes.

Authors:  Michael J Raupach; Jonas J Astrin; Karsten Hannig; Marcell K Peters; Mark Y Stoeckle; Johann-Wolfgang Wägele
Journal:  Front Zool       Date:  2010-09-13       Impact factor: 3.172

10.  Phylogeny and classification of the trapdoor spider genus Myrmekiaphila: an integrative approach to evaluating taxonomic hypotheses.

Authors:  Ashley L Bailey; Michael S Brewer; Brent E Hendrixson; Jason E Bond
Journal:  PLoS One       Date:  2010-09-14       Impact factor: 3.240

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