Literature DB >> 16214740

DNA barcodes for biosecurity: invasive species identification.

K F Armstrong1, S L Ball.   

Abstract

Biosecurity encompasses protecting against any risk through 'biological harm', not least being the economic impact from the spread of pest insects. Molecular diagnostic tools provide valuable support for the rapid and accurate identification of morphologically indistinct alien species. However, these tools currently lack standardization. They are not conducive to adaptation by multiple sectors or countries, or to coping with changing pest priorities. The data presented here identifies DNA barcodes as a very promising opportunity to address this. DNA of tussock moth and fruit fly specimens intercepted at the New Zealand border over the last decade were reanalysed using the cox1 sequence barcode approach. Species identifications were compared with the historical dataset obtained by PCR-RFLP of nuclear rDNA. There was 90 and 96% agreement between the methods for these species, respectively. Improvements included previous tussock moth 'unknowns' being placed to family, genera or species and further resolution within fruit fly species complexes. The analyses highlight several advantages of DNA barcodes, especially their adaptability and predictive value. This approach is a realistic platform on which to build a much more flexible system, with the potential to be adopted globally for the rapid and accurate identification of invasive alien species.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16214740      PMCID: PMC1609225          DOI: 10.1098/rstb.2005.1713

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  20 in total

Review 1.  The current state of insect molecular systematics: a thriving Tower of Babel.

Authors:  M S Caterino; S Cho; F A Sperling
Journal:  Annu Rev Entomol       Date:  2000       Impact factor: 19.686

2.  Impacts of Molecular Diagnostic Technologies on Plant Disease Management.

Authors:  Robert R Martin; Delano James; C André Lévesque
Journal:  Annu Rev Phytopathol       Date:  2000-09       Impact factor: 13.078

3.  A unified definition of biosecurity.

Authors:  Laura A Meyerson; Jamie K Reaser
Journal:  Science       Date:  2002-01-04       Impact factor: 47.728

4.  Biological identifications through DNA barcodes.

Authors:  Paul D N Hebert; Alina Cywinska; Shelley L Ball; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-02-07       Impact factor: 5.349

5.  Close genetic similarity between two sympatric species of tephritid fruit fly reproductively isolated by mating time.

Authors:  J Morrow; L Scott; B Congdon; D Yeates; M Frommer; J Sved
Journal:  Evolution       Date:  2000-06       Impact factor: 3.694

6.  Automated species identification: why not?

Authors:  Kevin J Gaston; Mark A O'Neill
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-04-29       Impact factor: 6.237

7.  Wedding biodiversity inventory of a large and complex Lepidoptera fauna with DNA barcoding.

Authors:  Daniel H Janzen; Mehrdad Hajibabaei; John M Burns; Winnie Hallwachs; Ed Remigio; Paul D N Hebert
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

8.  A biochemical key to adult members of the Anopheles gambiae group of species (Diptera: Culicidae).

Authors:  S J Miles
Journal:  J Med Entomol       Date:  1979-03-23       Impact factor: 2.278

9.  Differences in straggling rates between two genera of dove lice (Insecta: Phthiraptera) reinforce population genetic and cophylogenetic patterns.

Authors:  Noah Kerness Whiteman; Diego Santiago-Alarcon; Kevin P Johnson; Patricia G Parker
Journal:  Int J Parasitol       Date:  2004-09       Impact factor: 3.981

Review 10.  Invasive phytophagous pests arising through a recent tropical evolutionary radiation: the Bactrocera dorsalis complex of fruit flies.

Authors:  Anthony R Clarke; Karen F Armstrong; Amy E Carmichael; John R Milne; S Raghu; George K Roderick; David K Yeates
Journal:  Annu Rev Entomol       Date:  2005       Impact factor: 19.686

View more
  100 in total

1.  Population genetic structure of the melon fly, Bactrocera cucurbitae (Coquillett) (Diptera: Tephritidae) based on mitochondrial cytochrome oxidase (COI) gene sequences.

Authors:  Chandra S Prabhakar; Pawan K Mehta; Pankaj Sood; Sunil K Singh; Prachi Sharma; Prem N Sharma
Journal:  Genetica       Date:  2012-06-02       Impact factor: 1.082

2.  Obtaining molecular data for all life stages of Typhlodromus (Typhlodromus) exhilaratus (Mesostigmata: Phytoseiidae): consequences for species identification.

Authors:  M Okassa; S Kreiter; M-S Tixier
Journal:  Exp Appl Acarol       Date:  2012-03-29       Impact factor: 2.132

3.  Highlights of the Didymellaceae: A polyphasic approach to characterise Phoma and related pleosporalean genera.

Authors:  M M Aveskamp; J de Gruyter; J H C Woudenberg; G J M Verkley; P W Crous
Journal:  Stud Mycol       Date:  2010       Impact factor: 16.097

4.  A likelihood ratio test for species membership based on DNA sequence data.

Authors:  Mikhail V Matz; Rasmus Nielsen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

5.  The problems and promise of DNA barcodes for species diagnosis of primate biomaterials.

Authors:  Joseph G Lorenz; Whitney E Jackson; Jeanne C Beck; Robert Hanner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

6.  Classification of nucleotide sequences using support vector machines.

Authors:  Tae-Kun Seo
Journal:  J Mol Evol       Date:  2010-08-26       Impact factor: 2.395

7.  Molecular identification of Phortica variegata and Phortica semivirgo (Drosophilidae, Steganinae) by PCR-RFLP of the mitochondrial cytochrome oxidase c subunit I gene.

Authors:  Cinzia Cantacessi; Donato Traversa; Gabriella Testini; Riccardo Paolo Lia; Claudia Cafarchia; Jan Máca; Domenico Otranto
Journal:  Parasitol Res       Date:  2008-06-27       Impact factor: 2.289

8.  Genetic homogeneity in South American tomato pinworm, Tuta absoluta: a new invasive pest to oriental region.

Authors:  P R Shashank; S Twinkle; K Chandrashekar; Naresh M Meshram; Sachin S Suroshe; A S R Bajracharya
Journal:  3 Biotech       Date:  2018-07-31       Impact factor: 2.406

9.  Improving the efficiency of lepidopteran pest detection and surveillance: constraints and opportunities for multiple-species trapping.

Authors:  Eckehard G Brockerhoff; D Maxwell Suckling; Alain Roques; Hervé Jactel; Manuela Branco; Andrew M Twidle; Victor C Mastro; Mark O Kimberley
Journal:  J Chem Ecol       Date:  2012-12-20       Impact factor: 2.626

10.  "Crown of thorns" of Daphnia: an exceptional inducible defense discovered by DNA barcoding.

Authors:  Christian Laforsch; Andreas Haas; Nina Jung; Klaus Schwenk; Ralph Tollrian; Adam Petrusek
Journal:  Commun Integr Biol       Date:  2009-09
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.