Literature DB >> 15365031

Multiplex PCR method for identifying recombinant vaccine-related polioviruses.

David R Kilpatrick1, Karen Ching, Jane Iber, Ray Campagnoli, Christopher J Freeman, Nada Mishrik, Hong-Mei Liu, Mark A Pallansch, Olen M Kew.   

Abstract

The recent discovery of recombinant circulating vaccine-derived poliovirus (recombinant cVDPV) has highlighted the need for enhanced global poliovirus surveillance to assure timely detection of any future cVDPV outbreaks. Six pairs of Sabin strain-specific recombinant primers were designed to permit rapid screening for VDPV recombinants by PCR.

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Year:  2004        PMID： 15365031      PMCID： PMC516318          DOI： 10.1128/JCM.42.9.4313-4315.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  23 in total

1.  Retrospective analysis of a local cessation of vaccination against poliomyelitis: a possible scenario for the future.

Authors:  Ekaterina A Korotkova; Renee Park; Elena A Cherkasova; Galina Y Lipskaya; Konstantin M Chumakov; Esfir V Feldman; Olen M Kew; Vadim I Agol
Journal:  J Virol       Date:  2003-12       Impact factor: 5.103

2.  Evolution of the Sabin strain of type 3 poliovirus in an immunodeficient patient during the entire 637-day period of virus excretion.

Authors:  J Martín; G Dunn; R Hull; V Patel; P D Minor
Journal:  J Virol       Date:  2000-04       Impact factor: 5.103

3.  Circulation of type 1 vaccine-derived poliovirus in the Philippines in 2001.

Authors:  Hiroyuki Shimizu; Bruce Thorley; Fem Julia Paladin; Kerri Anne Brussen; Vicki Stambos; Lilly Yuen; Andi Utama; Yoshio Tano; Minetaro Arita; Hiromu Yoshida; Tetsuo Yoneyama; Agnes Benegas; Sigrun Roesel; Mark Pallansch; Olen Kew; Tatsuo Miyamura
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

4.  The natural genomic variability of poliovirus analyzed by a restriction fragment length polymorphism assay.

Authors:  J Balanant; S Guillot; A Candrea; F Delpeyroux; R Crainic
Journal:  Virology       Date:  1991-10       Impact factor: 3.616

5.  Detection and identification of vaccine-related polioviruses by the polymerase chain reaction.

Authors:  C F Yang; L De; B P Holloway; M A Pallansch; O M Kew
Journal:  Virus Res       Date:  1991-07       Impact factor: 3.303

6.  Group-specific identification of polioviruses by PCR using primers containing mixed-base or deoxyinosine residue at positions of codon degeneracy.

Authors:  D R Kilpatrick; B Nottay; C F Yang; S J Yang; M N Mulders; B P Holloway; M A Pallansch; O M Kew
Journal:  J Clin Microbiol       Date:  1996-12       Impact factor: 5.948

7.  Comparative study of five methods for intratypic differentiation of polioviruses.

Authors:  H G van der Avoort; B P Hull; T Hovi; M A Pallansch; O M Kew; R Crainic; D J Wood; M N Mulders; A M van Loon
Journal:  J Clin Microbiol       Date:  1995-10       Impact factor: 5.948

8.  Complete nucleotide sequences of all three poliovirus serotype genomes. Implication for genetic relationship, gene function and antigenic determinants.

Authors:  H Toyoda; M Kohara; Y Kataoka; T Suganuma; T Omata; N Imura; A Nomoto
Journal:  J Mol Biol       Date:  1984-04-25       Impact factor: 5.469

9.  Evolution of poliovirus type I during 5.5 years of prolonged enteral replication in an immunodeficient patient.

Authors:  A Bellmunt; G May; R Zell; P Pring-Akerblom; W Verhagen; A Heim
Journal:  Virology       Date:  1999-12-20       Impact factor: 3.616

10.  Identification of vaccine-related polioviruses by hybridization with specific RNA probes.

Authors:  L De; B Nottay; C F Yang; B P Holloway; M Pallansch; O Kew
Journal:  J Clin Microbiol       Date:  1995-03       Impact factor: 5.948
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  12 in total

1.  Rapid group-, serotype-, and vaccine strain-specific identification of poliovirus isolates by real-time reverse transcription-PCR using degenerate primers and probes containing deoxyinosine residues.

Authors:  David R Kilpatrick; Chen-Fu Yang; Karen Ching; Annelet Vincent; Jane Iber; Ray Campagnoli; Mark Mandelbaum; Lina De; Su-Ju Yang; Allan Nix; Olen M Kew
Journal:  J Clin Microbiol       Date:  2009-04-22       Impact factor: 5.948

2.  Limited and localized outbreak of newly emergent type 2 vaccine-derived poliovirus in Sichuan, China.

Authors:  Dongmei Yan; Yong Zhang; Shuangli Zhu; Na Chen; Xiaolei Li; Dongyan Wang; Xiaozhen Ma; Hui Zhu; Wenbin Tong; Wenbo Xu
Journal:  Clin Vaccine Immunol       Date:  2014-05-21

3.  Kinetics of poliovirus shedding following oral vaccination as measured by quantitative reverse transcription-PCR versus culture.

Authors:  Mami Taniuchi; Sharmin Begum; Md Jashim Uddin; James A Platts-Mills; Jie Liu; Beth D Kirkpatrick; Anwarul H Chowdhury; Khondoker M Jamil; Rashidul Haque; William A Petri; Eric R Houpt
Journal:  J Clin Microbiol       Date:  2014-11-05       Impact factor: 5.948

4.  Intratypic recombination among lineages of type 1 vaccine-derived poliovirus emerging during chronic infection of an immunodeficient patient.

Authors:  Chen-Fu Yang; Hour-Young Chen; Jaume Jorba; Hui-Chih Sun; Su-Ju Yang; Hsiang-Chi Lee; Yhu-Chering Huang; Tzou-Yien Lin; Pei-Jer Chen; Hiroyuki Shimizu; Yorihiro Nishimura; Andi Utama; Mark Pallansch; Tatsuo Miyamura; Olen Kew; Jyh-Yuan Yang
Journal:  J Virol       Date:  2005-10       Impact factor: 5.103

Review 5.  Recombination among human non-polio enteroviruses: implications for epidemiology and evolution.

Authors:  Zaharoula Kyriakopoulou; Vaia Pliaka; Grigoris D Amoutzias; Panayotis Markoulatos
Journal:  Virus Genes       Date:  2014-12-24       Impact factor: 2.332

6.  Emergence and localized circulation of a vaccine-derived poliovirus in an isolated mountain community in Guangxi, China.

Authors:  Dongmei Yan; Li Li; Shuangli Zhu; Yong Zhang; Junjing An; Dongyan Wang; Ning Wen; Jaume Jorba; Wei Liu; Ge Zhong; Lin Huang; Olen Kew; Xiaofeng Liang; Wenbo Xu
Journal:  J Clin Microbiol       Date:  2010-07-14       Impact factor: 5.948

7.  Identification of vaccine-derived polioviruses using dual-stage real-time RT-PCR.

Authors:  David R Kilpatrick; Karen Ching; Jane Iber; Qi Chen; Su-Ju Yang; Lina De; A J Williams; Mark Mandelbaum; Hong Sun; M Steven Oberste; Olen M Kew
Journal:  J Virol Methods       Date:  2013-12-07       Impact factor: 2.014

8.  Development of a multiplex RT-PCR assay for the identification of recombination types at different genomic regions of vaccine-derived polioviruses.

Authors:  T G Dimitriou; Z Kyriakopoulou; D Tsakogiannis; A Fikatas; C Gartzonika; S Levidiotou-Stefanou; P Markoulatos
Journal:  Virus Genes       Date:  2016-04-20       Impact factor: 2.332

9.  Multiple independent emergences of type 2 vaccine-derived polioviruses during a large outbreak in northern Nigeria.

Authors:  Cara C Burns; Jing Shaw; Jaume Jorba; David Bukbuk; Festus Adu; Nicksy Gumede; Muhammed Ali Pate; Emmanuel Ade Abanida; Alex Gasasira; Jane Iber; Qi Chen; Annelet Vincent; Paul Chenoweth; Elizabeth Henderson; Kathleen Wannemuehler; Asif Naeem; Rifqiyah Nur Umami; Yorihiro Nishimura; Hiroyuki Shimizu; Marycelin Baba; Adekunle Adeniji; A J Williams; David R Kilpatrick; M Steven Oberste; Steven G Wassilak; Oyewale Tomori; Mark A Pallansch; Olen Kew
Journal:  J Virol       Date:  2013-02-13       Impact factor: 5.103

10.  Limited duration of vaccine poliovirus and other enterovirus excretion among human immunodeficiency virus infected children in Kenya.

Authors:  Nino Khetsuriani; Rita Helfand; Mark Pallansch; Olen Kew; Ashley Fowlkes; M Steven Oberste; Peter Tukei; Joseph Muli; Ernest Makokha; Howard Gary
Journal:  BMC Infect Dis       Date:  2009-08-23       Impact factor: 3.090
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