Literature DB >> 15361017

A submission model for use in the indexing, searching, and retrieval of distributed pathology case and tissue specimens.

Ahmad H Namini1, David A Berkowicz, Isaac S Kohane, Henry Chueh.   

Abstract

This paper describes the Shared Pathology Informatics Network (SPIN) submission model for uploading de-identified XML annotations of pathology case and specimen information to a distributed peer-to-peer network architecture. SPIN use cases, architecture, and technologies, as well as pathology information design is described. With the architecture currently in use by six member institutions, SPIN appears to be a viable, secure methodology to submit pathology information for query and specimen retrieval by investigators

Mesh:

Year:  2004        PMID: 15361017

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  12 in total

1.  A translational engine at the national scale: informatics for integrating biology and the bedside.

Authors:  Isaac S Kohane; Susanne E Churchill; Shawn N Murphy
Journal:  J Am Med Inform Assoc       Date:  2011-11-10       Impact factor: 4.497

2.  SPIN query tools for de-identified research on a humongous database.

Authors:  Clement J McDonald; Paul Dexter; Gunther Schadow; Henry C Chueh; Greg Abernathy; John Hook; Lonnie Blevins; J Marc Overhage; Jules J Berman
Journal:  AMIA Annu Symp Proc       Date:  2005

3.  Automating tissue bank annotation from pathology reports - comparison to a gold standard expert annotation set.

Authors:  Kaihong Liu; Kevin J Mitchell; Wendy W Chapman; Rebecca S Crowley
Journal:  AMIA Annu Symp Proc       Date:  2005

4.  AEGIS: a robust and scalable real-time public health surveillance system.

Authors:  Ben Y Reis; Chaim Kirby; Lucy E Hadden; Karen Olson; Andrew J McMurry; James B Daniel; Kenneth D Mandl
Journal:  J Am Med Inform Assoc       Date:  2007-06-28       Impact factor: 4.497

5.  A self-scaling, distributed information architecture for public health, research, and clinical care.

Authors:  Andrew J McMurry; Clint A Gilbert; Ben Y Reis; Henry C Chueh; Isaac S Kohane; Kenneth D Mandl
Journal:  J Am Med Inform Assoc       Date:  2007-04-25       Impact factor: 4.497

6.  The Shared Health Research Information Network (SHRINE): a prototype federated query tool for clinical data repositories.

Authors:  Griffin M Weber; Shawn N Murphy; Andrew J McMurry; Douglas Macfadden; Daniel J Nigrin; Susanne Churchill; Isaac S Kohane
Journal:  J Am Med Inform Assoc       Date:  2009-06-30       Impact factor: 4.497

7.  Federated queries of clinical data repositories: the sum of the parts does not equal the whole.

Authors:  Griffin M Weber
Journal:  J Am Med Inform Assoc       Date:  2013-01-24       Impact factor: 4.497

8.  An i2b2-based, generalizable, open source, self-scaling chronic disease registry.

Authors:  Marc D Natter; Justin Quan; David M Ortiz; Athos Bousvaros; Norman T Ilowite; Christi J Inman; Keith Marsolo; Andrew J McMurry; Christy I Sandborg; Laura E Schanberg; Carol A Wallace; Robert W Warren; Griffin M Weber; Kenneth D Mandl
Journal:  J Am Med Inform Assoc       Date:  2012-06-25       Impact factor: 4.497

9.  An informatics solution for informing care delivery of immediate public health risks to their patients.

Authors:  Joseph S Lombardo; Nedra Garrett; Wayne Loschen; Richard Seagraves; Barbara Nichols; Steven Babin
Journal:  Online J Public Health Inform       Date:  2009-12-10

10.  Automated de-identification of free-text medical records.

Authors:  Ishna Neamatullah; Margaret M Douglass; Li-wei H Lehman; Andrew Reisner; Mauricio Villarroel; William J Long; Peter Szolovits; George B Moody; Roger G Mark; Gari D Clifford
Journal:  BMC Med Inform Decis Mak       Date:  2008-07-24       Impact factor: 2.796

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