Literature DB >> 15353801

Reverse methanogenesis: testing the hypothesis with environmental genomics.

Steven J Hallam1, Nik Putnam, Christina M Preston, John C Detter, Daniel Rokhsar, Paul M Richardson, Edward F DeLong.   

Abstract

Microbial methane consumption in anoxic sediments significantly impacts the global environment by reducing the flux of greenhouse gases from ocean to atmosphere. Despite its significance, the biological mechanisms controlling anaerobic methane oxidation are not well characterized. One current model suggests that relatives of methane-producing Archaea developed the capacity to reverse methanogenesis and thereby to consume methane to produce cellular carbon and energy. We report here a test of the "reverse-methanogenesis" hypothesis by genomic analyses of methane-oxidizing Archaea from deep-sea sediments. Our results show that nearly all genes typically associated with methane production are present in one specific group of archaeal methanotrophs. These genome-based observations support previous hypotheses and provide an informed foundation for metabolic modeling of anaerobic methane oxidation.

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Year:  2004        PMID: 15353801     DOI: 10.1126/science.1100025

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  155 in total

1.  Structure of a methyl-coenzyme M reductase from Black Sea mats that oxidize methane anaerobically.

Authors:  Seigo Shima; Martin Krueger; Tobias Weinert; Ulrike Demmer; Jörg Kahnt; Rudolf K Thauer; Ulrich Ermler
Journal:  Nature       Date:  2011-11-27       Impact factor: 49.962

2.  Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1.

Authors:  Sari Peura; Alexander Eiler; Stefan Bertilsson; Hannu Nykänen; Marja Tiirola; Roger I Jones
Journal:  ISME J       Date:  2012-03-15       Impact factor: 10.302

3.  The key nickel enzyme of methanogenesis catalyses the anaerobic oxidation of methane.

Authors:  Silvan Scheller; Meike Goenrich; Reinhard Boecher; Rudolf K Thauer; Bernhard Jaun
Journal:  Nature       Date:  2010-06-03       Impact factor: 49.962

Review 4.  Archaea--timeline of the third domain.

Authors:  Ricardo Cavicchioli
Journal:  Nat Rev Microbiol       Date:  2010-12-06       Impact factor: 60.633

5.  The genome of Pseudomonas fluorescens strain R124 demonstrates phenotypic adaptation to the mineral environment.

Authors:  Michael D Barton; Michael Petronio; Juan G Giarrizzo; Bethany V Bowling; Hazel A Barton
Journal:  J Bacteriol       Date:  2013-08-30       Impact factor: 3.490

6.  Communal metabolism of methane and the rare Earth element switch.

Authors:  Zheng Yu; Ludmila Chistoserdova
Journal:  J Bacteriol       Date:  2017-06-19       Impact factor: 3.490

7.  Phylogenetic analysis of Archaea in the deep-sea sediments of west Pacific Warm Pool.

Authors:  Peng Wang; Xiang Xiao; Fengping Wang
Journal:  Extremophiles       Date:  2005-03-11       Impact factor: 2.395

8.  Diversity of Archaea in marine sediments from Skan Bay, Alaska, including cultivated methanogens, and description of Methanogenium boonei sp. nov.

Authors:  Melissa M Kendall; George D Wardlaw; Chin F Tang; Adam S Bonin; Yitai Liu; David L Valentine
Journal:  Appl Environ Microbiol       Date:  2006-11-22       Impact factor: 4.792

9.  Potential for alternative intron-exon pairings in group II intron RmInt1 from Sinorhizobium meliloti and its relatives.

Authors:  María Costa; François Michel; Nicolás Toro
Journal:  RNA       Date:  2006-01-23       Impact factor: 4.942

Review 10.  Anaerobic functionalization of unactivated C-H bonds.

Authors:  Squire J Booker
Journal:  Curr Opin Chem Biol       Date:  2009-03-16       Impact factor: 8.822

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