Literature DB >> 15351354

High-throughput X-ray crystallography for drug discovery.

Tom L Blundell1, S Patel.   

Abstract

Knowledge of the three-dimensional structures of protein targets has the potential to greatly accelerate drug discovery, but technical challenges and time constraints have traditionally limited its use to lead optimization. Its application is now being extended beyond structure determination into new approaches for lead discovery. Structure-activity relationships by nuclear magnetic resonance have been widely used to detect ligand binding and to give some indication of the location of the binding site. X-ray crystallography has the advantage of defining ligand-binding sites with greater certainty. High-throughput approaches make this method applicable to screening to identify molecular fragments that bind protein targets, and to defining precisely their binding sites. X-ray crystallography can then be used as a rapid technique to guide the elaboration of the fragments into larger molecular weight compounds that might be useful leads for drug discovery.

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Year:  2004        PMID: 15351354     DOI: 10.1016/j.coph.2004.04.007

Source DB:  PubMed          Journal:  Curr Opin Pharmacol        ISSN: 1471-4892            Impact factor:   5.547


  17 in total

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Authors:  Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-04-21

Review 2.  Nematode phospholipid metabolism: an example of closing the genome-structure-function circle.

Authors:  Soon Goo Lee; Joseph M Jez
Journal:  Trends Parasitol       Date:  2014-03-28

Review 3.  On the relevance of defining protein structures in cancer research.

Authors:  Inés G Muñoz; Franciso J Blanco; Guillermo Montoya
Journal:  Clin Transl Oncol       Date:  2008-04       Impact factor: 3.405

Review 4.  Cryo-EM in drug discovery: achievements, limitations and prospects.

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Journal:  Nat Rev Drug Discov       Date:  2018-06-08       Impact factor: 84.694

5.  Approaches to automated protein crystal harvesting.

Authors:  Marc C Deller; Bernhard Rupp
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-01-28       Impact factor: 1.056

Review 6.  Biophysics in drug discovery: impact, challenges and opportunities.

Authors:  Jean-Paul Renaud; Chun-Wa Chung; U Helena Danielson; Ursula Egner; Michael Hennig; Roderick E Hubbard; Herbert Nar
Journal:  Nat Rev Drug Discov       Date:  2016-08-12       Impact factor: 84.694

7.  Supramolecular displacement-mediated activation of a silent fluorescence probe for label-free ligand screening.

Authors:  Diego Amado Torres; Malar A Azagarsamy; S Thayumanavan
Journal:  J Am Chem Soc       Date:  2012-04-23       Impact factor: 15.419

8.  Characterizing protein crystal contacts and their role in crystallization: rubredoxin as a case study.

Authors:  Diana Fusco; Jeffrey J Headd; Alfonso De Simone; Jun Wang; Patrick Charbonneau
Journal:  Soft Matter       Date:  2014-01-14       Impact factor: 3.679

Review 9.  Differential hydrogen/deuterium exchange mass spectrometry analysis of protein-ligand interactions.

Authors:  Michael J Chalmers; Scott A Busby; Bruce D Pascal; Graham M West; Patrick R Griffin
Journal:  Expert Rev Proteomics       Date:  2011-02       Impact factor: 3.940

10.  Optimal ligand descriptor for pocket recognition based on the Beta-shape.

Authors:  Jae-Kwan Kim; Chung-In Won; Jehyun Cha; Kichun Lee; Deok-Soo Kim
Journal:  PLoS One       Date:  2015-04-02       Impact factor: 3.240

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