Literature DB >> 15314026

UNR, a new partner of poly(A)-binding protein, plays a key role in translationally coupled mRNA turnover mediated by the c-fos major coding-region determinant.

Tsung-Cheng Chang1, Akio Yamashita, Chyi-Ying A Chen, Yukiko Yamashita, Wenmiao Zhu, Simon Durdan, Avak Kahvejian, Nahum Sonenberg, Ann-Bin Shyu.   

Abstract

Messenger RNA decay mediated by the c-fos major protein coding-region determinant of instability (mCRD) is a useful system for studying translationally coupled mRNA turnover. Among the five mCRD-associated proteins identified previously, UNR was found to be an mCRD-binding protein and also a PABP-interacting protein. Interaction between UNR and PABP is necessary for the full destabilization function of the mCRD. By testing different classes of mammalian poly(A) nucleases, we identified CCR4 as a poly(A) nuclease involved in the mCRD-mediated rapid deadenylation in vivo and also associated with UNR. Blocking either translation initiation or elongation greatly impeded poly(A) shortening and mRNA decay mediated by the mCRD, demonstrating that the deadenylation step is coupled to ongoing translation of the message. These findings suggest a model in which the mCRD/UNR complex serves as a "landing/assembly" platform for formation of a deadenylation/decay mRNA-protein complex on an mCRD-containing transcript. The complex is dormant prior to translation. Accelerated deadenylation and decay of the transcript follows ribosome transit through the mCRD. This study provides new insights into a mechanism by which interplay between mRNA turnover and translation determines the lifespan of an mCRD-containing mRNA in the cytoplasm.

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Year:  2004        PMID: 15314026      PMCID: PMC514181          DOI: 10.1101/gad.1219104

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  56 in total

1.  A mechanism for translationally coupled mRNA turnover: interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex.

Authors:  C Grosset; C Y Chen; N Xu; N Sonenberg; H Jacquemin-Sablon; A B Shyu
Journal:  Cell       Date:  2000-09-29       Impact factor: 41.582

2.  An mRNA surveillance mechanism that eliminates transcripts lacking termination codons.

Authors:  Pamela A Frischmeyer; Ambro van Hoof; Kathryn O'Donnell; Anthony L Guerrerio; Roy Parker; Harry C Dietz
Journal:  Science       Date:  2002-03-22       Impact factor: 47.728

3.  Rapid deadenylation triggered by a nonsense codon precedes decay of the RNA body in a mammalian cytoplasmic nonsense-mediated decay pathway.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Mol Cell Biol       Date:  2003-07       Impact factor: 4.272

4.  Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits.

Authors:  T K Albert; M Lemaire; N L van Berkum; R Gentz; M A Collart; H T Timmers
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

5.  Two distinct destabilizing elements in the c-fos message trigger deadenylation as a first step in rapid mRNA decay.

Authors:  A B Shyu; J G Belasco; M E Greenberg
Journal:  Genes Dev       Date:  1991-02       Impact factor: 11.361

Review 6.  Primary response genes induced by growth factors and tumor promoters.

Authors:  H R Herschman
Journal:  Annu Rev Biochem       Date:  1991       Impact factor: 23.643

7.  The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae.

Authors:  M Tucker; M A Valencia-Sanchez; R R Staples; J Chen; C L Denis; R Parker
Journal:  Cell       Date:  2001-02-09       Impact factor: 41.582

8.  Autoregulated instability of beta-tubulin mRNAs by recognition of the nascent amino terminus of beta-tubulin.

Authors:  T J Yen; P S Machlin; D W Cleveland
Journal:  Nature       Date:  1988-08-18       Impact factor: 49.962

9.  The eukaryotic polypeptide chain releasing factor (eRF3/GSPT) carrying the translation termination signal to the 3'-Poly(A) tail of mRNA. Direct association of erf3/GSPT with polyadenylate-binding protein.

Authors:  S Hoshino; M Imai; T Kobayashi; N Uchida; T Katada
Journal:  J Biol Chem       Date:  1999-06-11       Impact factor: 5.157

10.  Regulation of c-myc mRNA decay by translational pausing in a coding region instability determinant.

Authors:  Ira Lemm; Jeff Ross
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

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  69 in total

1.  Path to facilitate the prediction of functional amino acid substitutions in red blood cell disorders--a computational approach.

Authors:  Rajith B; George Priya Doss C
Journal:  PLoS One       Date:  2011-09-13       Impact factor: 3.240

2.  A versatile ribosomal protein promoter-based reporter system for selective assessment of RNA stability and post-transcriptional control.

Authors:  Edward Hitti; Suhad Al-Yahya; Maher Al-Saif; Peer Mohideen; Linah Mahmoud; Stephen J Polyak; Khalid S A Khabar
Journal:  RNA       Date:  2010-04-23       Impact factor: 4.942

Review 3.  Translation initiation: variations in the mechanism can be anticipated.

Authors:  Naglis Malys; John E G McCarthy
Journal:  Cell Mol Life Sci       Date:  2010-11-13       Impact factor: 9.261

Review 4.  Mechanisms of deadenylation-dependent decay.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-09-15       Impact factor: 9.957

5.  Tethering KSRP, a decay-promoting AU-rich element-binding protein, to mRNAs elicits mRNA decay.

Authors:  Chu-Fang Chou; Alok Mulky; Sushmit Maitra; Wei-Jye Lin; Roberto Gherzi; John Kappes; Ching-Yi Chen
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

Review 6.  Coding region: the neglected post-transcriptional code.

Authors:  Eun Kyung Lee; Myriam Gorospe
Journal:  RNA Biol       Date:  2011-01-01       Impact factor: 4.652

7.  An unbiased proteomics approach to identify human cytomegalovirus RNA-associated proteins.

Authors:  Erik M Lenarcic; Benjamin J Ziehr; Nathaniel J Moorman
Journal:  Virology       Date:  2015-03-09       Impact factor: 3.616

Review 8.  Deadenylation and P-bodies.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Adv Exp Med Biol       Date:  2013       Impact factor: 2.622

9.  Cytoplasmic RNA Granules and Viral Infection.

Authors:  Wei-Chih Tsai; Richard E Lloyd
Journal:  Annu Rev Virol       Date:  2014-11       Impact factor: 10.431

10.  Functional domains of Drosophila UNR in translational control.

Authors:  Irina Abaza; Fátima Gebauer
Journal:  RNA       Date:  2008-01-18       Impact factor: 4.942

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