Literature DB >> 23224971

Deadenylation and P-bodies.

Chyi-Ying A Chen1, Ann-Bin Shyu.   

Abstract

Deadenylation is the major step in triggering mRNA decay and results in mRNA translation inhibition in eukaryotic cells. Therefore, it is plausible that deadenylation also induces the mRNP remodeling required for formation of GW bodies or RNA processing bodies (P-bodies), which harbor translationally silenced mRNPs. In this chapter, we discuss several examples to illustrate the roles of deadenylation in regulating gene expression. We highlight several lines of evidence indicating that even though non-translatable mRNPs may be prepared and/or assembled into P-bodies in different ways, deadenylation is always a necessary, and perhaps the earliest, step in mRNA decay pathways that enable mRNP remodeling required for P-body formation. Thus, deadenylation and the participating deadenylases are not simply required for preparing mRNA substrates; they play an indispensable role both structurally and functionally in P-body formation and regulation.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23224971      PMCID: PMC3804309          DOI: 10.1007/978-1-4614-5107-5_11

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  57 in total

1.  A mechanism for translationally coupled mRNA turnover: interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex.

Authors:  C Grosset; C Y Chen; N Xu; N Sonenberg; H Jacquemin-Sablon; A B Shyu
Journal:  Cell       Date:  2000-09-29       Impact factor: 41.582

2.  Rapid deadenylation triggered by a nonsense codon precedes decay of the RNA body in a mammalian cytoplasmic nonsense-mediated decay pathway.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Mol Cell Biol       Date:  2003-07       Impact factor: 4.272

Review 3.  Mechanisms of deadenylation-dependent decay.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-09-15       Impact factor: 9.957

Review 4.  From birth to death: the complex lives of eukaryotic mRNAs.

Authors:  Melissa J Moore
Journal:  Science       Date:  2005-09-02       Impact factor: 47.728

Review 5.  P bodies: at the crossroads of post-transcriptional pathways.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Elisa Izaurralde
Journal:  Nat Rev Mol Cell Biol       Date:  2007-01       Impact factor: 94.444

6.  P-body formation is a consequence, not the cause, of RNA-mediated gene silencing.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Daniel Schweizer; Elisa Izaurralde
Journal:  Mol Cell Biol       Date:  2007-04-02       Impact factor: 4.272

7.  MicroRNAs direct rapid deadenylation of mRNA.

Authors:  Ligang Wu; Jihua Fan; Joel G Belasco
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-22       Impact factor: 11.205

8.  Two distinct destabilizing elements in the c-fos message trigger deadenylation as a first step in rapid mRNA decay.

Authors:  A B Shyu; J G Belasco; M E Greenberg
Journal:  Genes Dev       Date:  1991-02       Impact factor: 11.361

Review 9.  Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells.

Authors:  A Jacobson; S W Peltz
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

10.  A phosphorylated cytoplasmic autoantigen, GW182, associates with a unique population of human mRNAs within novel cytoplasmic speckles.

Authors:  Theophany Eystathioy; Edward K L Chan; Scott A Tenenbaum; Jack D Keene; Kevin Griffith; Marvin J Fritzler
Journal:  Mol Biol Cell       Date:  2002-04       Impact factor: 4.138

View more
  9 in total

1.  The transcription factor ERG recruits CCR4-NOT to control mRNA decay and mitotic progression.

Authors:  Xavier Rambout; Cécile Detiffe; Jonathan Bruyr; Emeline Mariavelle; Majid Cherkaoui; Sylvain Brohée; Pauline Demoitié; Marielle Lebrun; Romuald Soin; Bart Lesage; Katia Guedri; Monique Beullens; Mathieu Bollen; Thalia A Farazi; Richard Kettmann; Ingrid Struman; David E Hill; Marc Vidal; Véronique Kruys; Nicolas Simonis; Jean-Claude Twizere; Franck Dequiedt
Journal:  Nat Struct Mol Biol       Date:  2016-06-06       Impact factor: 15.369

2.  KSHV RNA-binding protein ORF57 inhibits P-body formation to promote viral multiplication by interaction with Ago2 and GW182.

Authors:  Nishi R Sharma; Vladimir Majerciak; Michael J Kruhlak; Lulu Yu; Jeong Gu Kang; Acong Yang; Shuo Gu; Marvin J Fritzler; Zhi-Ming Zheng
Journal:  Nucleic Acids Res       Date:  2019-09-26       Impact factor: 16.971

Review 3.  RNA Quality Control as a Key to Suppressing RNA Silencing of Endogenous Genes in Plants.

Authors:  Lin Liu; Xuemei Chen
Journal:  Mol Plant       Date:  2016-03-30       Impact factor: 13.164

4.  Dead end1 is an essential partner of NANOS2 for selective binding of target RNAs in male germ cell development.

Authors:  Atsushi Suzuki; Yuki Niimi; Kaori Shinmyozu; Zhi Zhou; Makoto Kiso; Yumiko Saga
Journal:  EMBO Rep       Date:  2015-11-20       Impact factor: 8.807

Review 5.  RNA-Binding Proteins Hold Key Roles in Function, Dysfunction, and Disease.

Authors:  Sophia Kelaini; Celine Chan; Victoria A Cornelius; Andriana Margariti
Journal:  Biology (Basel)       Date:  2021-04-24

6.  A global profiling of uncapped mRNAs under cold stress reveals specific decay patterns and endonucleolytic cleavages in Brachypodium distachyon.

Authors:  Jingyu Zhang; Zhiwei Mao; Kang Chong
Journal:  Genome Biol       Date:  2013-08-30       Impact factor: 13.583

7.  New roles for nuclear EGFR in regulating the stability and translation of mRNAs associated with VEGF signaling.

Authors:  Klaus Dittmann; Claus Mayer; Stefan Czemmel; Stephan M Huber; H Peter Rodemann
Journal:  PLoS One       Date:  2017-12-18       Impact factor: 3.240

Review 8.  Standing your ground to exoribonucleases: Function of Flavivirus long non-coding RNAs.

Authors:  Phillida A Charley; Jeffrey Wilusz
Journal:  Virus Res       Date:  2015-09-11       Impact factor: 3.303

9.  CCR4, a RNA decay factor, is hijacked by a plant cytorhabdovirus phosphoprotein to facilitate virus replication.

Authors:  Zhen-Jia Zhang; Qiang Gao; Xiao-Dong Fang; Zhi-Hang Ding; Dong-Min Gao; Wen-Ya Xu; Qing Cao; Ji-Hui Qiao; Yi-Zhou Yang; Chenggui Han; Ying Wang; Xuefeng Yuan; Dawei Li; Xian-Bing Wang
Journal:  Elife       Date:  2020-03-24       Impact factor: 8.140

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.