Literature DB >> 15303862

The unusual bifunctional catalysis of epimerization and desaturation by carbapenem synthase.

Maya Topf1, Gregory M Sandala, David M Smith, Christopher J Schofield, Christopher J Easton, Leo Radom.   

Abstract

High-level ab initio calculations have been used to study the mechanism for the conversion of (3S,5S)-carbapenam to the biologically active beta-lactam antibiotic, (5R)-carbapenem, catalyzed by carbapenem synthase. This process involves epimerization at C5 and desaturation at C2/C3. Our calculations suggest that the reaction proceeds via initial abstraction of the C5 hydrogen atom, followed by epimerization. In addition, we have identified an attractive mechanism for coupling the epimerization and desaturation in thermodynamically favorable steps with the aid of an external reductant. Other mechanisms that have been examined have significantly higher energy requirements or do not appear to be consistent with available experimental evidence.

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Year:  2004        PMID: 15303862     DOI: 10.1021/ja047899v

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

1.  Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of α-Heteroatom Assistance.

Authors:  Noah P Dunham; Wei-Chen Chang; Andrew J Mitchell; Ryan J Martinie; Bo Zhang; Jonathan A Bergman; Lauren J Rajakovich; Bo Wang; Alexey Silakov; Carsten Krebs; Amie K Boal; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2018-06-04       Impact factor: 15.419

Review 2.  Catalytic Mechanisms of Fe(II)- and 2-Oxoglutarate-dependent Oxygenases.

Authors:  Salette Martinez; Robert P Hausinger
Journal:  J Biol Chem       Date:  2015-07-07       Impact factor: 5.157

3.  A high-throughput screen for the engineered production of β-lactam antibiotics.

Authors:  Ryan M Phelan; Benjamin J DiPardo; Craig A Townsend
Journal:  ACS Chem Biol       Date:  2012-03-19       Impact factor: 5.100

Review 4.  Dioxygen activation by nonheme iron enzymes with the 2-His-1-carboxylate facial triad that generate high-valent oxoiron oxidants.

Authors:  Subhasree Kal; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2017-01-10       Impact factor: 3.358

5.  Mechanism of the C5 stereoinversion reaction in the biosynthesis of carbapenem antibiotics.

Authors:  Wei-chen Chang; Yisong Guo; Chen Wang; Susan E Butch; Amy C Rosenzweig; Amie K Boal; Carsten Krebs; J Martin Bollinger
Journal:  Science       Date:  2014-03-07       Impact factor: 47.728

6.  Mechanistic insights into the bifunctional non-heme iron oxygenase carbapenem synthase by active site saturation mutagenesis.

Authors:  Ryan M Phelan; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2013-05-13       Impact factor: 15.419

7.  Distribution and prediction of catalytic domains in 2-oxoglutarate dependent dioxygenases.

Authors:  Siddhartha Kundu
Journal:  BMC Res Notes       Date:  2012-08-04

Review 8.  Non-heme Fe(IV)-oxo intermediates.

Authors:  Carsten Krebs; Danica Galonić Fujimori; Christopher T Walsh; J Martin Bollinger
Journal:  Acc Chem Res       Date:  2007-06-02       Impact factor: 22.384

Review 9.  The diverse and pervasive chemistries of the alpha-keto acid dependent enzymes.

Authors:  Vincent Purpero; Graham R Moran
Journal:  J Biol Inorg Chem       Date:  2007-04-13       Impact factor: 3.862

Review 10.  Roles of 2-oxoglutarate oxygenases and isopenicillin N synthase in β-lactam biosynthesis.

Authors:  Patrick Rabe; Jos J A G Kamps; Christopher J Schofield; Christopher T Lohans
Journal:  Nat Prod Rep       Date:  2018-08-15       Impact factor: 13.423

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