Literature DB >> 15291544

3-nitro-3-deaza-2'-deoxyadenosine as a versatile photocleavable 2'-deoxyadenosine mimic.

Caroline Crey-Desbiolles1, Jean Lhomme, Pascal Dumy, Mitsuharu Kotera.   

Abstract

A new photocleavable 2'-deoxyadenosine mimic, 3-nitro-3-deaza-2'-deoxyadenosine (NidA), was prepared and introduced into DNA fragments via its 6-O-trimethylphenyl precursor phophoramidite. Photocleavage of the resulting oligonucleotide is highly efficient in single and double strands. Hybridization properties of NidA are very similar to those of deoxyadenosine.

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Year:  2004        PMID: 15291544     DOI: 10.1021/ja047976m

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

1.  Preparation and analysis of oligonucleotides containing lesions resulting from C5'-oxidation.

Authors:  Tetsuya Kodama; Marc M Greenberg
Journal:  J Org Chem       Date:  2005-11-25       Impact factor: 4.354

2.  Impact of 3-deazapurine nucleobases on RNA properties.

Authors:  Raphael Bereiter; Maximilian Himmelstoß; Eva Renard; Elisabeth Mairhofer; Michaela Egger; Kathrin Breuker; Christoph Kreutz; Eric Ennifar; Ronald Micura
Journal:  Nucleic Acids Res       Date:  2021-05-07       Impact factor: 16.971

3.  Reactivity of Nucleic Acid Radicals.

Authors:  Marc M Greenberg
Journal:  Adv Phys Org Chem       Date:  2016       Impact factor: 2.833

4.  Turning the 10-23 DNAzyme on and off with light.

Authors:  Julia L Richards; Garry K Seward; Yu-Hsiu Wang; Ivan J Dmochowski
Journal:  Chembiochem       Date:  2010-02-15       Impact factor: 3.164

5.  RNA bandages for photoregulating in vitro protein synthesis.

Authors:  Julia L Richards; XinJing Tang; Anna Turetsky; Ivan J Dmochowski
Journal:  Bioorg Med Chem Lett       Date:  2008-09-30       Impact factor: 2.823

6.  Chemical synthesis, DNA incorporation and biological study of a new photocleavable 2'-deoxyadenosine mimic.

Authors:  Nathalie Berthet; Caroline Crey-Desbiolles; Mitsuharu Kotera; Pascal Dumy
Journal:  Nucleic Acids Res       Date:  2009-07-08       Impact factor: 16.971

  6 in total

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