Literature DB >> 15277576

Gating transitions in bacterial ion channels measured at 3 microns resolution.

George Shapovalov1, Henry A Lester.   

Abstract

Ion channels of high conductance (>200 pS) are widespread among prokaryotes and eukaryotes. Two examples, the Escherichia coli mechanosensitive ion channels Ec-MscS and Ec-MscL, pass currents of 125-300 pA. To resolve temporal details of conductance transitions, a patch-clamp setup was optimized for low-noise recordings at a time resolution of 3 microns (10-20 times faster than usual). Analyses of the high-resolution recordings confirm that Ec-MscL visits many subconductance states and show that most of the intersubstate transitions occur more slowly than the effective resolution of 3 micros. There is a clear trend toward longer transition times for the larger transitions. In Ec-MscS recordings, the majority of the observed full conductance transitions are also composite. We detected a short-lived (approximately 20 microns) Ec-MscS substate at 2/3 of full conductance; transitions between 2/3 and full conductance did not show fine structure and had a time course limited by the achieved resolution. Opening and closing transitions in MscS are symmetrical and are not preceded or followed by smaller, rapid currents ("anticipations" or "regrets"). Compared with other, lower-conductance channels, these measurements may detect unusually early states in the transitions from fully closed to fully open. Increased temporal resolution at the single-molecule level reveals that some elementary steps of structural transitions are composite and follow several alternative pathways, while others still escape resolution. High-bandwidth, low-noise single-channel measurements may provide details about state transitions in other high-conductance channels; and similar procedures may also be applied to channel- and nanopore-based single-molecule DNA measurements.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15277576      PMCID: PMC2229625          DOI: 10.1085/jgp.200409087

Source DB:  PubMed          Journal:  J Gen Physiol        ISSN: 0022-1295            Impact factor:   4.086


  33 in total

1.  The gating mechanism of the large mechanosensitive channel MscL.

Authors:  S Sukharev; M Betanzos; C S Chiang; H R Guy
Journal:  Nature       Date:  2001-02-08       Impact factor: 49.962

2.  Electrophoretic plugging of nuclear pores by using the nuclear hourglass technique.

Authors:  T Danker; V Shahin; A Schlune; C Schäfer; H Oberleithner
Journal:  J Membr Biol       Date:  2001-11-15       Impact factor: 1.843

3.  Molecular dynamics simulations of wild-type and mutant forms of the Mycobacterium tuberculosis MscL channel.

Authors:  D E Elmore; D A Dougherty
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

4.  Purification and functional reconstitution of the recombinant large mechanosensitive ion channel (MscL) of Escherichia coli.

Authors:  C C Häse; A C Le Dain; B Martinac
Journal:  J Biol Chem       Date:  1995-08-04       Impact factor: 5.157

5.  Large conductance channel in plasma membranes of astrocytic cells is functionally related to mitochondrial VDAC-channels.

Authors:  B Guibert; R Dermietzel; D Siemen
Journal:  Int J Biochem Cell Biol       Date:  1998-03       Impact factor: 5.085

6.  Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel.

Authors:  G Chang; R H Spencer; A T Lee; M T Barclay; D C Rees
Journal:  Science       Date:  1998-12-18       Impact factor: 47.728

7.  Energetic and spatial parameters for gating of the bacterial large conductance mechanosensitive channel, MscL.

Authors:  S I Sukharev; W J Sigurdson; C Kung; F Sachs
Journal:  J Gen Physiol       Date:  1999-04       Impact factor: 4.086

Review 8.  EPR approaches to ion channel structure and function.

Authors:  E Perozo; L G Cuello; D M Cortes; Y S Liu; P Sompornpisut
Journal:  Novartis Found Symp       Date:  2002

9.  Single channel currents at six microsecond resolution elicited by acetylcholine in mouse myoballs.

Authors:  F Parzefall; R Wilhelm; M Heckmann; J Dudel
Journal:  J Physiol       Date:  1998-10-01       Impact factor: 5.182

10.  Two types of mechanosensitive channels in the Escherichia coli cell envelope: solubilization and functional reconstitution.

Authors:  S I Sukharev; B Martinac; V Y Arshavsky; C Kung
Journal:  Biophys J       Date:  1993-07       Impact factor: 4.033

View more
  37 in total

1.  Strength-duration relationship for extracellular neural stimulation: numerical and analytical models.

Authors:  David Boinagrov; Jim Loudin; Daniel Palanker
Journal:  J Neurophysiol       Date:  2010-08-11       Impact factor: 2.714

2.  Hidden Markov analysis of improved bandwidth mechanosensitive ion channel data.

Authors:  Ibrahim M Almanjahie; R Nazim Khan; Robin K Milne; Takeshi Nomura; Boris Martinac
Journal:  Eur Biophys J       Date:  2015-08-02       Impact factor: 1.733

3.  Computational modeling of neurons: intensity-duration relationship of extracellular electrical stimulation for changes in intracellular calcium.

Authors:  Robert D Adams; Rebecca K Willits; Amy B Harkins
Journal:  J Neurophysiol       Date:  2015-10-28       Impact factor: 2.714

4.  Ion conduction through MscS as determined by electrophysiology and simulation.

Authors:  Marcos Sotomayor; Valeria Vásquez; Eduardo Perozo; Klaus Schulten
Journal:  Biophys J       Date:  2006-11-17       Impact factor: 4.033

5.  A finite element framework for studying the mechanical response of macromolecules: application to the gating of the mechanosensitive channel MscL.

Authors:  Yuye Tang; Guoxin Cao; Xi Chen; Jejoong Yoo; Arun Yethiraj; Qiang Cui
Journal:  Biophys J       Date:  2006-05-26       Impact factor: 4.033

6.  Electrostatic properties of the mechanosensitive channel of small conductance MscS.

Authors:  Marcos Sotomayor; Trudy A van der Straaten; Umberto Ravaioli; Klaus Schulten
Journal:  Biophys J       Date:  2006-03-02       Impact factor: 4.033

7.  Single-nucleotide discrimination in immobilized DNA oligonucleotides with a biological nanopore.

Authors:  David Stoddart; Andrew J Heron; Ellina Mikhailova; Giovanni Maglia; Hagan Bayley
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-20       Impact factor: 11.205

8.  Automated maximum likelihood separation of signal from baseline in noisy quantal data.

Authors:  William J Bruno; Ghanim Ullah; Don-On Daniel Mak; John E Pearson
Journal:  Biophys J       Date:  2013-07-02       Impact factor: 4.033

Review 9.  Feeling the hidden mechanical forces in lipid bilayer is an original sense.

Authors:  Andriy Anishkin; Stephen H Loukin; Jinfeng Teng; Ching Kung
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-21       Impact factor: 11.205

Review 10.  Discovery through the computational microscope.

Authors:  Eric H Lee; Jen Hsin; Marcos Sotomayor; Gemma Comellas; Klaus Schulten
Journal:  Structure       Date:  2009-10-14       Impact factor: 5.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.