Literature DB >> 15272164

Spectacular improvement of X-ray diffraction through fast desiccation of protein crystals.

Chantal Abergel1.   

Abstract

Succeeding in getting a protein to crystallize is not always the final hurdle in the determination of its three-dimensional structure. A relatively frequent and particularly vexing situation is the production of macroscopically well formed crystals that exhibit no suitable diffraction pattern. In this paper, three independent cases (i.e. proteins and crystallization conditions) are reported of spectacular diffraction-pattern improvement through a simple crystal-handling procedure that was discovered serendipitously. The procedure basically consists of removing a non-diffracting frozen crystal from the X-ray beam, plunging it into a soaking solution made of the original crystallization solution supplemented with a traditional cryoprotectant and then letting it dry in the evaporating sitting drop for some time (15 min to several hours). The treated crystals are then remounted and exhibit a huge improvement in their diffraction intensity and resolution. In all three cases presented here, the crystal quality shifted from unusable to perfectly suitable for structure determination. In addition to being a 'last resort' procedure for experimentalists struggling with non-diffracting crystals, this puzzling effect constitutes one more challenging problem for theoretical protein crystallographers.

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Year:  2004        PMID: 15272164     DOI: 10.1107/S0907444904013678

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  16 in total

1.  Improving diffraction resolution using a new dehydration method.

Authors:  Qingqiu Huang; Doletha M E Szebenyi
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-01-28       Impact factor: 1.056

2.  Preliminary crystallographic analysis of a possible transcription factor encoded by the mimivirus L544 gene.

Authors:  Alexandre Ciaccafava; Audrey Lartigue; Pascal Mansuelle; Sandra Jeudy; Chantal Abergel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-07-20

Review 3.  Optimization of crystallization conditions for biological macromolecules.

Authors:  Alexander McPherson; Bob Cudney
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-10-31       Impact factor: 1.056

4.  Preparation, crystallization, and preliminary crystallographic analysis of wild-type and mutant human TREM-2 ectodomains linked to neurodegenerative and inflammatory diseases.

Authors:  Daniel L Kober; Kelsey M Wanhainen; Britney M Johnson; David T Randolph; Michael J Holtzman; Tom J Brett
Journal:  Protein Expr Purif       Date:  2014-02-07       Impact factor: 1.650

5.  Improved X-ray diffraction from Bacillus megaterium penicillin G acylase crystals through long cryosoaking dehydration.

Authors:  Catleya Rojviriya; Thunyaluck Pratumrat; Mark A Saper; Jirundon Yuvaniyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-26

6.  Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.

Authors:  Sandra Jeudy; Audrey Lartigue; Jean-Michel Claverie; Chantal Abergel
Journal:  J Virol       Date:  2009-05-13       Impact factor: 5.103

7.  Strategies for crystallizing a chromatin protein in complex with the nucleosome core particle.

Authors:  Ravindra D Makde; Song Tan
Journal:  Anal Biochem       Date:  2013-08-06       Impact factor: 3.365

8.  Increasing the X-ray diffraction power of protein crystals by dehydration: the case of bovine serum albumin and a survey of literature data.

Authors:  Irene Russo Krauss; Filomena Sica; Carlo Andrea Mattia; Antonello Merlino
Journal:  Int J Mol Sci       Date:  2012-03-21       Impact factor: 6.208

9.  mRNA maturation in giant viruses: variation on a theme.

Authors:  Stéphane Priet; Audrey Lartigue; Françoise Debart; Jean-Michel Claverie; Chantal Abergel
Journal:  Nucleic Acids Res       Date:  2015-03-16       Impact factor: 16.971

10.  High-level over-expression, purification, and crystallization of a novel phospholipase C/sphingomyelinase from Pseudomonas aeruginosa.

Authors:  Daphné Truan; Adriana Vasil; Martin Stonehouse; Michael L Vasil; Ehmke Pohl
Journal:  Protein Expr Purif       Date:  2012-11-29       Impact factor: 1.650

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