Literature DB >> 15242608

Structural snapshots of human HDAC8 provide insights into the class I histone deacetylases.

John R Somoza1, Robert J Skene, Bradley A Katz, Clifford Mol, Joseph D Ho, Andy J Jennings, Christine Luong, Andrew Arvai, Joseph J Buggy, Ellen Chi, Jie Tang, Bi-Ching Sang, Erik Verner, Robert Wynands, Ellen M Leahy, Douglas R Dougan, Gyorgy Snell, Marc Navre, Mark W Knuth, Ronald V Swanson, Duncan E McRee, Leslie W Tari.   

Abstract

Modulation of the acetylation state of histones plays a pivotal role in the regulation of gene expression. Histone deacetylases (HDACs) catalyze the removal of acetyl groups from lysines near the N termini of histones. This reaction promotes the condensation of chromatin, leading to repression of transcription. HDAC deregulation has been linked to several types of cancer, suggesting a potential use for HDAC inhibitors in oncology. Here we describe the first crystal structures of a human HDAC: the structures of human HDAC8 complexed with four structurally diverse hydroxamate inhibitors. This work sheds light on the catalytic mechanism of the HDACs, and on differences in substrate specificity across the HDAC family. The structure also suggests how phosphorylation of Ser39 affects HDAC8 activity.

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Year:  2004        PMID: 15242608     DOI: 10.1016/j.str.2004.04.012

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  195 in total

Review 1.  Macrocyclic histone deacetylase inhibitors.

Authors:  Sandra C Mwakwari; Vishal Patil; William Guerrant; Adegboyega K Oyelere
Journal:  Curr Top Med Chem       Date:  2010       Impact factor: 3.295

2.  Non-peptide macrocyclic histone deacetylase inhibitors derived from tricyclic ketolide skeleton.

Authors:  Sandra C Mwakwari; William Guerrant; Vishal Patil; Shabana I Khan; Babu L Tekwani; Zachary A Gurard-Levin; Milan Mrksich; Adegboyega K Oyelere
Journal:  J Med Chem       Date:  2010-08-26       Impact factor: 7.446

Review 3.  The redox basis of epigenetic modifications: from mechanisms to functional consequences.

Authors:  Anthony R Cyr; Frederick E Domann
Journal:  Antioxid Redox Signal       Date:  2011-02-05       Impact factor: 8.401

4.  Design, synthesis, modeling, biological evaluation and photoaffinity labeling studies of novel series of photoreactive benzamide probes for histone deacetylase 2.

Authors:  Aditya Sudheer Vaidya; Bhargava Karumudi; Emma Mendonca; Antonett Madriaga; Hazem Abdelkarim; Richard B van Breemen; Pavel A Petukhov
Journal:  Bioorg Med Chem Lett       Date:  2012-06-18       Impact factor: 2.823

5.  Plants Release Precursors of Histone Deacetylase Inhibitors to Suppress Growth of Competitors.

Authors:  Sascha Venturelli; Regina G Belz; Andreas Kämper; Alexander Berger; Kyra von Horn; André Wegner; Alexander Böcker; Gérald Zabulon; Tobias Langenecker; Oliver Kohlbacher; Fredy Barneche; Detlef Weigel; Ulrich M Lauer; Michael Bitzer; Claude Becker
Journal:  Plant Cell       Date:  2015-11-03       Impact factor: 11.277

Review 6.  Discovery and mechanism of natural products as modulators of histone acetylation.

Authors:  Lilibeth A Salvador; Hendrik Luesch
Journal:  Curr Drug Targets       Date:  2012-07       Impact factor: 3.465

Review 7.  Structural aspects of HDAC8 mechanism and dysfunction in Cornelia de Lange syndrome spectrum disorders.

Authors:  Matthew A Deardorff; Nicholas J Porter; David W Christianson
Journal:  Protein Sci       Date:  2016-09-16       Impact factor: 6.725

8.  Design, synthesis, biological evaluation, and structural characterization of potent histone deacetylase inhibitors based on cyclic alpha/beta-tetrapeptide architectures.

Authors:  Ana Montero; John M Beierle; Christian A Olsen; M Reza Ghadiri
Journal:  J Am Chem Soc       Date:  2009-03-04       Impact factor: 15.419

Review 9.  Impact of the Protein Data Bank on antineoplastic approvals.

Authors:  John D Westbrook; Rose Soskind; Brian P Hudson; Stephen K Burley
Journal:  Drug Discov Today       Date:  2020-02-14       Impact factor: 7.851

Review 10.  Structural determinants of affinity and selectivity in the binding of inhibitors to histone deacetylase 6.

Authors:  Jeremy D Osko; David W Christianson
Journal:  Bioorg Med Chem Lett       Date:  2020-02-11       Impact factor: 2.823

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