Literature DB >> 22594471

Discovery and mechanism of natural products as modulators of histone acetylation.

Lilibeth A Salvador1, Hendrik Luesch.   

Abstract

Small molecules that modulate histone acetylation by targeting key enzymes mediating this posttranslational modification - histone acetyltransferases and histone deacetylases - are validated chemotherapeutic agents for the treatment of cancer. This area of research has seen a rapid increase in interest in the past decade, with the structurally diverse natural products-derived compounds at its forefront. These secondary metabolites from various biological sources target this epigenetic modification through distinct mechanisms of enzyme regulation by utilizing a diverse array of pharmacophores. We review the discovery of these compounds and discuss their modes of inhibition together with their downstream biological effects.

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Year:  2012        PMID: 22594471      PMCID: PMC3802541          DOI: 10.2174/138945012802008973

Source DB:  PubMed          Journal:  Curr Drug Targets        ISSN: 1389-4501            Impact factor:   3.465


  156 in total

1.  FR235222, a fungal metabolite, is a novel immunosuppressant that inhibits mammalian histone deacetylase (HDAC) II. Biological activities in animal models.

Authors:  Hiroaki Mori; Fumie Abe; Satoko Furukawa; Shigetada Furukawa; Fumihiko Sakai; Motohiro Hino; Takashi Fujii
Journal:  J Antibiot (Tokyo)       Date:  2003-02       Impact factor: 2.649

2.  The identification of a novel natural activator of p300 histone acetyltranferase provides new insights into the modulation mechanism of this enzyme.

Authors:  Fabrizio Dal Piaz; Alessandra Tosco; Daniela Eletto; Anna L Piccinelli; Ornella Moltedo; Silvia Franceschelli; Gianluca Sbardella; Paolo Remondelli; Luca Rastrelli; Loredana Vesci; Claudio Pisano; Nunziatina De Tommasi
Journal:  Chembiochem       Date:  2010-04-12       Impact factor: 3.164

3.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

4.  Stat3 dimerization regulated by reversible acetylation of a single lysine residue.

Authors:  Zheng-Long Yuan; Ying-Jie Guan; Devasis Chatterjee; Y Eugene Chin
Journal:  Science       Date:  2005-01-14       Impact factor: 47.728

5.  Psammaplin A is a natural prodrug that inhibits class I histone deacetylase.

Authors:  Dong Hoon Kim; Jongheon Shin; Ho Jeong Kwon
Journal:  Exp Mol Med       Date:  2007-02-28       Impact factor: 8.718

6.  Anti-tumor effect of apicidin on Ishikawa human endometrial cancer cells both in vitro and in vivo by blocking histone deacetylase 3 and 4.

Authors:  Mee Young Ahn; Hae Young Chung; Wahn Soo Choi; Byung Mu Lee; Sungpil Yoon; Hyung Sik Kim
Journal:  Int J Oncol       Date:  2010-01       Impact factor: 5.650

7.  Structural snapshots of human HDAC8 provide insights into the class I histone deacetylases.

Authors:  John R Somoza; Robert J Skene; Bradley A Katz; Clifford Mol; Joseph D Ho; Andy J Jennings; Christine Luong; Andrew Arvai; Joseph J Buggy; Ellen Chi; Jie Tang; Bi-Ching Sang; Erik Verner; Robert Wynands; Ellen M Leahy; Douglas R Dougan; Gyorgy Snell; Marc Navre; Mark W Knuth; Ronald V Swanson; Duncan E McRee; Leslie W Tari
Journal:  Structure       Date:  2004-07       Impact factor: 5.006

8.  Proteomic analysis identifies protein targets responsible for depsipeptide sensitivity in tumor cells.

Authors:  Guozhu Chen; Ailing Li; Ming Zhao; Ying Gao; Tao Zhou; Yuanji Xu; Zhiyan Du; Xuemin Zhang; Xiaodan Yu
Journal:  J Proteome Res       Date:  2008-06-13       Impact factor: 4.466

9.  Psammaplin A as a general activator of cell-based signaling assays via HDAC inhibition and studies on some bromotyrosine derivatives.

Authors:  Malcolm W B McCulloch; Gary S Coombs; Nikhil Banerjee; Tim S Bugni; Kendell M Cannon; Mary Kay Harper; Charles A Veltri; David M Virshup; Chris M Ireland
Journal:  Bioorg Med Chem       Date:  2008-11-05       Impact factor: 3.641

10.  Synthesis and conformation-activity relationships of the peptide isosteres of FK228 and largazole.

Authors:  Albert A Bowers; Thomas J Greshock; Nathan West; Guillermina Estiu; Stuart L Schreiber; Olaf Wiest; Robert M Williams; James E Bradner
Journal:  J Am Chem Soc       Date:  2009-03-04       Impact factor: 15.419

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  11 in total

Review 1.  An overview of naturally occurring histone deacetylase inhibitors.

Authors:  Bumki Kim; Jiyong Hong
Journal:  Curr Top Med Chem       Date:  2015       Impact factor: 3.295

Review 2.  Biological targets and mechanisms of action of natural products from marine cyanobacteria.

Authors:  Lilibeth A Salvador-Reyes; Hendrik Luesch
Journal:  Nat Prod Rep       Date:  2015-03       Impact factor: 13.423

Review 3.  Histone Deacetylase Inhibitors: A Prospect in Drug Discovery.

Authors:  Rakesh Yadav; Pooja Mishra; Divya Yadav
Journal:  Turk J Pharm Sci       Date:  2018-12-31

Review 4.  Medicinal significance of naturally occurring cyclotetrapeptides.

Authors:  Muna Ali Abdalla
Journal:  J Nat Med       Date:  2016-06-14       Impact factor: 2.343

5.  Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites.

Authors:  Paris R Watson; Timothy W Craven; Xinting Li; Stephen Rettie; Parisa Hosseinzadeh; Fátima Pardo-Avila; Asim K Bera; Vikram Khipple Mulligan; Peilong Lu; Alexander S Ford; Brian D Weitzner; Lance J Stewart; Adam P Moyer; Maddalena Di Piazza; Joshua G Whalen; Per Jr Greisen; David W Christianson; David Baker
Journal:  Nat Commun       Date:  2021-06-07       Impact factor: 14.919

6.  A potent HDAC inhibitor, 1-alaninechlamydocin, from a Tolypocladium sp. induces G2/M cell cycle arrest and apoptosis in MIA PaCa-2 cells.

Authors:  Lin Du; April L Risinger; Jarrod B King; Douglas R Powell; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2014-07-07       Impact factor: 4.050

Review 7.  Histone deacetylase inhibitors in clinical studies as templates for new anticancer agents.

Authors:  Madhusoodanan Mottamal; Shilong Zheng; Tien L Huang; Guangdi Wang
Journal:  Molecules       Date:  2015-03-02       Impact factor: 4.411

8.  Tetrahydroisoquinolines as novel histone deacetylase inhibitors for treatment of cancer.

Authors:  Danqi Chen; Aijun Shen; Guanghua Fang; Hongchun Liu; Minmin Zhang; Shuai Tang; Bing Xiong; Lanping Ma; Meiyu Geng; Jingkang Shen
Journal:  Acta Pharm Sin B       Date:  2016-01-07       Impact factor: 11.413

9.  In silico structure-based discovery of a SARS-CoV-2 main protease inhibitor.

Authors:  Lei Wen; Kaiming Tang; Kenn Ka-Heng Chik; Chris Chun-Yiu Chan; Jessica Oi-Ling Tsang; Ronghui Liang; Jianli Cao; Yaoqiang Huang; Cuiting Luo; Jian-Piao Cai; Zi-Wei Ye; Feifei Yin; Hin Chu; Dong-Yan Jin; Kwok-Yung Yuen; Shuofeng Yuan; Jasper Fuk-Woo Chan
Journal:  Int J Biol Sci       Date:  2021-04-10       Impact factor: 6.580

Review 10.  Histone deacetylase inhibitors for cancer therapy: An evolutionarily ancient resistance response may explain their limited success.

Authors:  John A Halsall; Bryan M Turner
Journal:  Bioessays       Date:  2016-09-22       Impact factor: 4.345

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