Literature DB >> 15242597

Tandem repeat of a seven-bladed beta-propeller domain in oligoxyloglucan reducing-end-specific cellobiohydrolase.

Katsuro Yaoi1, Hidemasa Kondo, Natsuko Noro, Mamoru Suzuki, Sakae Tsuda, Yasushi Mitsuishi.   

Abstract

Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH; EC 3.2.1.150) is an exoglucanase that recognizes the reducing end of oligoxyloglucan and releases two glucosyl residue segments from the main chain. The X-ray crystal structure of OXG-RCBH determined at 2.2 A resolution reveals a unique feature of this enzyme; OXG-RCBH consists of a tandem repeat of two similar domains, which are both folded into seven-bladed beta-propeller structures. The sequence alignment of the propeller blades, based on the structure, indicates that a weak repeat of the amino acid sequence occurred seven times to construct each domain. There is a cleft that can accommodate the substrate oligosaccharide between the two domains, which is a putative substrate binding subsite. Mutation of either Asp35 or Asp465, located in the putative catalytic center, to Asn resulted in a protein with no detectable catalytic activity, indicating the critical role of these amino acids in catalysis.

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Year:  2004        PMID: 15242597     DOI: 10.1016/j.str.2004.04.020

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  11 in total

Review 1.  Genomics review of holocellulose deconstruction by aspergilli.

Authors:  Fernando Segato; André R L Damásio; Rosymar C de Lucas; Fabio M Squina; Rolf A Prade
Journal:  Microbiol Mol Biol Rev       Date:  2014-12       Impact factor: 11.056

2.  Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.

Authors:  Gregory Arnal; Peter J Stogios; Jathavan Asohan; Mohamed A Attia; Tatiana Skarina; Alexander Holm Viborg; Bernard Henrissat; Alexei Savchenko; Harry Brumer
Journal:  J Biol Chem       Date:  2019-07-19       Impact factor: 5.157

3.  Cloning and characterization of two xyloglucanases from Paenibacillus sp. strain KM21.

Authors:  Katsuro Yaoi; Tomonori Nakai; Yoshiro Kameda; Ayako Hiyoshi; Yasushi Mitsuishi
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

4.  Structure of Acidothermus cellulolyticus family 74 glycoside hydrolase at 1.82 Å resolution.

Authors:  Markus Alahuhta; William S Adney; Michael E Himmel; Vladimir V Lunin
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-11-28

Review 5.  Enzymatic degradation of xyloglucans by Aspergillus species: a comparative view of this genus.

Authors:  Tomohiko Matsuzawa; Akira Watanabe; Takahiro Shintani; Katsuya Gomi; Katsuro Yaoi
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-24       Impact factor: 4.813

6.  Structure and activity of Paenibacillus polymyxa xyloglucanase from glycoside hydrolase family 44.

Authors:  Antonio Ariza; Jens M Eklöf; Oliver Spadiut; Wendy A Offen; Shirley M Roberts; Werner Besenmatter; Esben P Friis; Michael Skjøt; Keith S Wilson; Harry Brumer; Gideon Davies
Journal:  J Biol Chem       Date:  2011-07-27       Impact factor: 5.157

7.  Sequence and structural analysis of the Asp-box motif and Asp-box beta-propellers; a widespread propeller-type characteristic of the Vps10 domain family and several glycoside hydrolase families.

Authors:  Esben M Quistgaard; Søren S Thirup
Journal:  BMC Struct Biol       Date:  2009-07-13

8.  Structural evidence for the evolution of xyloglucanase activity from xyloglucan endo-transglycosylases: biological implications for cell wall metabolism.

Authors:  Martin J Baumann; Jens M Eklöf; Gurvan Michel; Asa M Kallas; Tuula T Teeri; Mirjam Czjzek; Harry Brumer
Journal:  Plant Cell       Date:  2007-06-08       Impact factor: 11.277

9.  Crystallization and preliminary X-ray diffraction analysis of a new xyloglucanase from Xanthomonas campestris pv. campestris.

Authors:  Evandro Ares de Araújo; Atílio Tomazini; Marco Antonio Seiki Kadowaki; Mário Tyago Murakami; Igor Polikarpov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-25

10.  Pwp2 mediates UTP-B assembly via two structurally independent domains.

Authors:  Fanny Boissier; Christina Maria Schmidt; Jan Linnemann; Sébastien Fribourg; Jorge Perez-Fernandez
Journal:  Sci Rep       Date:  2017-06-09       Impact factor: 4.379

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