Literature DB >> 17557806

Structural evidence for the evolution of xyloglucanase activity from xyloglucan endo-transglycosylases: biological implications for cell wall metabolism.

Martin J Baumann1, Jens M Eklöf, Gurvan Michel, Asa M Kallas, Tuula T Teeri, Mirjam Czjzek, Harry Brumer.   

Abstract

High-resolution, three-dimensional structures of the archetypal glycoside hydrolase family 16 (GH16) endo-xyloglucanases Tm-NXG1 and Tm-NXG2 from nasturtium (Tropaeolum majus) have been solved by x-ray crystallography. Key structural features that modulate the relative rates of substrate hydrolysis to transglycosylation in the GH16 xyloglucan-active enzymes were identified by structure-function studies of the recombinantly expressed enzymes in comparison with data for the strict xyloglucan endo-transglycosylase Ptt-XET16-34 from hybrid aspen (Populus tremula x Populus tremuloides). Production of the loop deletion variant Tm-NXG1-DeltaYNIIG yielded an enzyme that was structurally similar to Ptt-XET16-34 and had a greatly increased transglycosylation:hydrolysis ratio. Comprehensive bioinformatic analyses of XTH gene products, together with detailed kinetic data, strongly suggest that xyloglucanase activity has evolved as a gain of function in an ancestral GH16 XET to meet specific biological requirements during seed germination, fruit ripening, and rapid wall expansion.

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Year:  2007        PMID: 17557806      PMCID: PMC1955714          DOI: 10.1105/tpc.107.051391

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  72 in total

1.  Cooperative disassembly of the cellulose-xyloglucan network of plant cell walls: parallels between cell expansion and fruit ripening.

Authors: 
Journal:  Trends Plant Sci       Date:  1999-05       Impact factor: 18.313

2.  wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models.

Authors:  A Perrakis; T K Sixma; K S Wilson; V S Lamzin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-07-01

3.  Mechanical effects of plant cell wall enzymes on cellulose/xyloglucan composites.

Authors:  Elisabeth Chanliaud; Jacquie De Silva; Barbara Strongitharm; George Jeronimidis; Michael J Gidley
Journal:  Plant J       Date:  2004-04       Impact factor: 6.417

4.  Poplar carbohydrate-active enzymes. Gene identification and expression analyses.

Authors:  Jane Geisler-Lee; Matt Geisler; Pedro M Coutinho; Bo Segerman; Nobuyuki Nishikubo; Junko Takahashi; Henrik Aspeborg; Soraya Djerbi; Emma Master; Sara Andersson-Gunnerås; Björn Sundberg; Stanislaw Karpinski; Tuula T Teeri; Leszek A Kleczkowski; Bernard Henrissat; Ewa J Mellerowicz
Journal:  Plant Physiol       Date:  2006-01-13       Impact factor: 8.340

5.  Ten isoenzymes of xyloglucan endotransglycosylase from plant cell walls select and cleave the donor substrate stochastically.

Authors:  N M Steele; Z Sulová; P Campbell; J Braam; V Farkas; S C Fry
Journal:  Biochem J       Date:  2001-05-01       Impact factor: 3.857

6.  Carbohydrate-active enzymes involved in the secondary cell wall biogenesis in hybrid aspen.

Authors:  Henrik Aspeborg; Jarmo Schrader; Pedro M Coutinho; Mark Stam; Asa Kallas; Soraya Djerbi; Peter Nilsson; Stuart Denman; Bahram Amini; Fredrik Sterky; Emma Master; Göran Sandberg; Ewa Mellerowicz; Björn Sundberg; Bernard Henrissat; Tuula T Teeri
Journal:  Plant Physiol       Date:  2005-02-25       Impact factor: 8.340

7.  Kinetic analysis using low-molecular mass xyloglucan oligosaccharides defines the catalytic mechanism of a Populus xyloglucan endotransglycosylase.

Authors:  Marc Saura-Valls; Régis Fauré; Sergi Ragàs; Kathleen Piens; Harry Brumer; Tuula T Teeri; Sylvain Cottaz; Hugues Driguez; Antoni Planas
Journal:  Biochem J       Date:  2006-04-01       Impact factor: 3.857

8.  Primary cell wall composition of bryophytes and charophytes.

Authors:  Zoë A Popper; Stephen C Fry
Journal:  Ann Bot       Date:  2003-01       Impact factor: 4.357

9.  N-linked glycosylation of native and recombinant cauliflower xyloglucan endotransglycosylase 16A.

Authors:  Hongbin Henriksson; Stuart E Denman; Iain D G Campuzano; Pia Ademark; Emma R Master; Tuula T Teeri; Harry Brumer
Journal:  Biochem J       Date:  2003-10-01       Impact factor: 3.857

10.  Crystal structures of a poplar xyloglucan endotransglycosylase reveal details of transglycosylation acceptor binding.

Authors:  Patrik Johansson; Harry Brumer; Martin J Baumann; Asa M Kallas; Hongbin Henriksson; Stuart E Denman; Tuula T Teeri; T Alwyn Jones
Journal:  Plant Cell       Date:  2004-03-12       Impact factor: 11.277

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  78 in total

1.  Xyloglucan endotransglycosylase/hydrolase genes in cotton and their role in fiber elongation.

Authors:  Joohyun Lee; Teresa H Burns; Ginger Light; Yan Sun; Mohamed Fokar; Yoshihisha Kasukabe; Koichi Fujisawa; Yoshihiko Maekawa; Randy D Allen
Journal:  Planta       Date:  2010-08-14       Impact factor: 4.116

2.  The XTH gene family: an update on enzyme structure, function, and phylogeny in xyloglucan remodeling.

Authors:  Jens M Eklöf; Harry Brumer
Journal:  Plant Physiol       Date:  2010-04-26       Impact factor: 8.340

Review 3.  The biochemistry and structural biology of plant cell wall deconstruction.

Authors:  Harry J Gilbert
Journal:  Plant Physiol       Date:  2010-04-20       Impact factor: 8.340

4.  The β-glucanase ZgLamA from Zobellia galactanivorans evolved a bent active site adapted for efficient degradation of algal laminarin.

Authors:  Aurore Labourel; Murielle Jam; Alexandra Jeudy; Jan-Hendrik Hehemann; Mirjam Czjzek; Gurvan Michel
Journal:  J Biol Chem       Date:  2013-12-11       Impact factor: 5.157

Review 5.  Cell wall integrity: targeted post-synthetic modifications to reveal its role in plant growth and defense against pathogens.

Authors:  Gennady Pogorelko; Vincenzo Lionetti; Daniela Bellincampi; Olga Zabotina
Journal:  Plant Signal Behav       Date:  2013-06-20

6.  Xyloglucan: the molecular muscle of trees.

Authors:  Ewa J Mellerowicz; Peter Immerzeel; Takahisa Hayashi
Journal:  Ann Bot       Date:  2008-08-30       Impact factor: 4.357

7.  Spatial-temporal analysis of polyethylene glycol-reduced aluminium accumulation and xyloglucan endotransglucosylase action in root tips of common bean (Phaseolus vulgaris).

Authors:  Maolin Zhang; Yanqi Ma; Walter J Horst; Zhong-Bao Yang
Journal:  Ann Bot       Date:  2016-04-22       Impact factor: 4.357

8.  A Cell Wall Proteome and Targeted Cell Wall Analyses Provide Novel Information on Hemicellulose Metabolism in Flax.

Authors:  Malika Chabi; Estelle Goulas; Celine C Leclercq; Isabelle de Waele; Christophe Rihouey; Ugo Cenci; Arnaud Day; Anne-Sophie Blervacq; Godfrey Neutelings; Ludovic Duponchel; Patrice Lerouge; Jean-François Hausman; Jenny Renaut; Simon Hawkins
Journal:  Mol Cell Proteomics       Date:  2017-07-13       Impact factor: 5.911

9.  The pepper extracellular xyloglucan-specific endo-β-1,4-glucanase inhibitor protein gene, CaXEGIP1, is required for plant cell death and defense responses.

Authors:  Hyong Woo Choi; Nak Hyun Kim; Yeon Kyeong Lee; Byung Kook Hwang
Journal:  Plant Physiol       Date:  2012-10-23       Impact factor: 8.340

10.  Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.

Authors:  Jan-Hendrik Hehemann; Amelia G Kelly; Nicholas A Pudlo; Eric C Martens; Alisdair B Boraston
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

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