Literature DB >> 15216938

Structural genomics on membrane proteins: the MePNet approach.

Kenneth Lundstrom1.   

Abstract

Of the 25,000 crystal structure entries deposited in public databases less than 1% are for membrane proteins; this gives a clear indication of the difficulties relating to structural biology and determination of this type of protein. To date, structural genomics networks have mainly focused on soluble proteins, despite the fact that membrane proteins constitute 60 to 70% of current drug targets. Technological improvement on a broad basis is the key to higher success rates, but this is generally not possible unless large functional networks are established. Several structural genomics initiatives, concentrating partly or fully on membrane proteins, have been established during the last few years and the Membrane Protein Network (MePNet; BioXtal, Switzerland) focuses specifically on the pharmaceutically attractive G protein-coupled receptors (GPCRs). Within MePNet, over 100 full-length GPCRs have been subjected to overexpression in bacterial, yeast and mammalian cells, followed by purification and crystallization studies.

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Year:  2004        PMID: 15216938

Source DB:  PubMed          Journal:  Curr Opin Drug Discov Devel        ISSN: 1367-6733


  7 in total

1.  High-throughput production of prokaryotic membrane proteins.

Authors:  Elena Dobrovetsky; Ming Liang Lu; Ronit Andorn-Broza; Galina Khutoreskaya; James E Bray; Alexei Savchenko; Cheryl H Arrowsmith; Aled M Edwards; Christopher M Koth
Journal:  J Struct Funct Genomics       Date:  2005

2.  Exploring the in meso crystallization mechanism by characterizing the lipid mesophase microenvironment during the growth of single transmembrane α-helical peptide crystals.

Authors:  Leonie van 't Hag; Konstantin Knoblich; Shane A Seabrook; Nigel M Kirby; Stephen T Mudie; Deborah Lau; Xu Li; Sally L Gras; Xavier Mulet; Matthew E Call; Melissa J Call; Calum J Drummond; Charlotte E Conn
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-07-28       Impact factor: 4.226

3.  Coverage of whole proteome by structural genomics observed through protein homology modeling database.

Authors:  Kei Yura; Akihiro Yamaguchi; Mitiko Go
Journal:  J Struct Funct Genomics       Date:  2006-12-05

4.  Fine Sampling of Sequence Space for Membrane Protein Structural Biology.

Authors:  Michael Loukeris; Zahra Assur Sanghai; Jeremie Vendome; Wayne A Hendrickson; Brian Kloss; Filippo Mancia
Journal:  J Mol Biol       Date:  2021-05-20       Impact factor: 6.151

Review 5.  Recent developments in membrane-protein structural genomics.

Authors:  Fei Philip Gao; Timothy A Cross
Journal:  Genome Biol       Date:  2006-01-03       Impact factor: 13.583

6.  Functional coverage of the human genome by existing structures, structural genomics targets, and homology models.

Authors:  Lei Xie; Philip E Bourne
Journal:  PLoS Comput Biol       Date:  2005-08-19       Impact factor: 4.475

7.  Using Haloarcula marismortui bacteriorhodopsin as a fusion tag for enhancing and visible expression of integral membrane proteins in Escherichia coli.

Authors:  Min-Feng Hsu; Tsung-Fu Yu; Chia-Cheng Chou; Hsu-Yuan Fu; Chii-Shen Yang; Andrew H J Wang
Journal:  PLoS One       Date:  2013-02-15       Impact factor: 3.240

  7 in total

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