Literature DB >> 15215893

A complex containing the CCR4 and CAF1 proteins is involved in mRNA deadenylation in Drosophila.

Claudia Temme1, Sophie Zaessinger, Sylke Meyer, Martine Simonelig, Elmar Wahle.   

Abstract

The CCR4-NOT complex is the major enzyme catalyzing mRNA deadenylation in Saccharomyces cerevisiae. We have identified homologs for almost all subunits of this complex in the Drosophila genome. Biochemical fractionation showed that the two likely catalytic subunits, CCR4 and CAF1, were associated with each other and with a poly(A)-specific 3' exonuclease activity. In Drosophila, the CCR4 and CAF1 proteins were ubiquitously expressed and present in cytoplasmic foci. Individual knock-down of several potential subunits of the Drosophila CCR4-NOT complex by RNAi in tissue culture cells led to a lengthening of bulk mRNA poly(A) tails. Knock-down of two individual subunits also interfered with the rapid deadenylation of Hsp70 mRNA during recovery from heat shock. Similarly, ccr4 mutant flies had elongated bulk poly(A) and a defect in Hsp70 mRNA deadenylation. A minor increase in bulk poly(A) tail length was also observed in Rga mutant flies, which are affected in the NOT2 subunit. The data show that the CCR4-NOT complex is conserved in Drosophila melanogaster and plays a role in general and regulated mRNA deadenylation.

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Year:  2004        PMID: 15215893      PMCID: PMC514940          DOI: 10.1038/sj.emboj.7600273

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  51 in total

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Journal:  EMBO J       Date:  2003-07-15       Impact factor: 11.598

2.  Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits.

Authors:  T K Albert; M Lemaire; N L van Berkum; R Gentz; M A Collart; H T Timmers
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

3.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

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Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

4.  The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae.

Authors:  M Tucker; M A Valencia-Sanchez; R R Staples; J Chen; C L Denis; R Parker
Journal:  Cell       Date:  2001-02-09       Impact factor: 41.582

Review 5.  mRNA stability in mammalian cells.

Authors:  J Ross
Journal:  Microbiol Rev       Date:  1995-09

6.  Regena (Rga), a Drosophila homolog of the global negative transcriptional regulator CDC36 (NOT2) from yeast, modifies gene expression and suppresses position effect variegation.

Authors:  M V Frolov; E V Benevolenskaya; J A Birchler
Journal:  Genetics       Date:  1998-01       Impact factor: 4.562

7.  Saccharomyces cerevisiae Ccr4-not complex contributes to the control of Msn2p-dependent transcription by the Ras/cAMP pathway.

Authors:  E Lenssen; U Oberholzer; J Labarre; C De Virgilio; M A Collart
Journal:  Mol Microbiol       Date:  2002-02       Impact factor: 3.501

8.  The Drosophila poly(A) binding protein-interacting protein, dPaip2, is a novel effector of cell growth.

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Journal:  Mol Cell Biol       Date:  2004-02       Impact factor: 4.272

9.  Preferential deadenylation of Hsp70 mRNA plays a key role in regulating Hsp70 expression in Drosophila melanogaster.

Authors:  R P Dellavalle; R Petersen; S Lindquist
Journal:  Mol Cell Biol       Date:  1994-06       Impact factor: 4.272

Review 10.  Global control of gene expression in yeast by the Ccr4-Not complex.

Authors:  Martine A Collart
Journal:  Gene       Date:  2003-08-14       Impact factor: 3.688

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  113 in total

1.  The role of the CNOT1 subunit of the CCR4-NOT complex in mRNA deadenylation and cell viability.

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Journal:  Protein Cell       Date:  2011-10-06       Impact factor: 14.870

Review 2.  Investigating the function of CAF1 deadenylases during plant stress responses.

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Journal:  Plant Signal Behav       Date:  2010-07-01

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Review 4.  Mechanisms of deadenylation-dependent decay.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-09-15       Impact factor: 9.957

5.  Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation.

Authors:  Claudia Temme; Lianbing Zhang; Elisabeth Kremmer; Christian Ihling; Aymeric Chartier; Andrea Sinz; Martine Simonelig; Elmar Wahle
Journal:  RNA       Date:  2010-05-26       Impact factor: 4.942

6.  Under the Tucson sun: a meeting in the desert on mRNA decay.

Authors:  Kristian E Baker; Ciarán Condon
Journal:  RNA       Date:  2004-11       Impact factor: 4.942

7.  Dynamic Control of Dendritic mRNA Expression by CNOT7 Regulates Synaptic Efficacy and Higher Cognitive Function.

Authors:  Rhonda L McFleder; Fernanda Mansur; Joel D Richter
Journal:  Cell Rep       Date:  2017-07-18       Impact factor: 9.423

8.  The conserved P body component HPat/Pat1 negatively regulates synaptic terminal growth at the larval Drosophila neuromuscular junction.

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9.  Genetic mapping of male pheromone response in the European corn borer identifies candidate genes regulating neurogenesis.

Authors:  Fotini A Koutroumpa; Astrid T Groot; Teun Dekker; David G Heckel
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10.  Arabidopsis deadenylases AtCAF1a and AtCAF1b play overlapping and distinct roles in mediating environmental stress responses.

Authors:  Justin W Walley; Dior R Kelley; Gergana Nestorova; David L Hirschberg; Katayoon Dehesh
Journal:  Plant Physiol       Date:  2009-12-02       Impact factor: 8.340

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