Literature DB >> 15213432

Novel techniques for weak alignment of proteins in solution using chemical tags coordinating lanthanide ions.

Takahisa Ikegami1, Laurent Verdier, Peyman Sakhaii, Susanne Grimme, Barbara Pescatore, Krishna Saxena, Klaus M Fiebig, Christian Griesinger.   

Abstract

A molecule with an anisotropic magnetic susceptibility is spontaneously aligned in a static magnetic field. Alignment of such a molecule yields residual dipolar couplings and pseudocontact shifts. Lanthanide ions have recently been successfully used to provide an anisotropic magnetic susceptibility in target molecules either by replacing a calcium ion with a lanthanide ion in calcium-binding proteins or by attaching an EDTA derivative to a cysteine residue via a disulfide bond. Here we describe a novel enantiomerically pure EDTA derived tag that aligns stronger due to its shorter linker and does not suffer from stereochemical diversity upon lanthanide complexation. We observed residual (15)N,(1)H-dipolar couplings of up to 8 Hz at 800 MHz induced by a single alignment tensor from this tag.

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Year:  2004        PMID: 15213432     DOI: 10.1023/B:JNMR.0000032611.72827.de

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  29 in total

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2.  Structural characterization of proteins with an attached ATCUN motif by paramagnetic relaxation enhancement NMR spectroscopy.

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4.  NMR solution structure and dynamics of the peptidyl-prolyl cis-trans isomerase domain of the trigger factor from Mycoplasma genitalium compared to FK506-binding protein.

Authors:  Martin Vogtherr; Doris M Jacobs; Tatjana N Parac; Marcus Maurer; Andreas Pahl; Krishna Saxena; Heinz Rüterjans; Christian Griesinger; Klaus M Fiebig
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5.  Dipolar couplings in multiple alignments suggest alpha helical motion in ubiquitin.

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Journal:  J Am Chem Soc       Date:  2003-07-09       Impact factor: 15.419

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8.  Calmodulin tagging provides a general method of using lanthanide induced magnetic field orientation to observe residual dipolar couplings in proteins in solution.

Authors:  J Feeny; B Birdsall; A F Bradbury; R R Biekofsky; P M Bayley
Journal:  J Biomol NMR       Date:  2001-09       Impact factor: 2.835

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10.  De novo determination of bond orientations and order parameters from residual dipolar couplings with high accuracy.

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Journal:  J Am Chem Soc       Date:  2003-08-27       Impact factor: 15.419

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  44 in total

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Journal:  J Biomol NMR       Date:  2012-05-26       Impact factor: 2.835

3.  Recent Advances in the Application of Solution NMR Spectroscopy to Multi-Span Integral Membrane Proteins.

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5.  Engineering encodable lanthanide-binding tags into loop regions of proteins.

Authors:  Katja Barthelmes; Anne M Reynolds; Ezra Peisach; Hendrik R A Jonker; Nicholas J DeNunzio; Karen N Allen; Barbara Imperiali; Harald Schwalbe
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7.  Efficient chi-tensor determination and NH assignment of paramagnetic proteins.

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8.  Observation of microsecond time-scale protein dynamics in the presence of Ln3+ ions: application to the N-terminal domain of cardiac troponin C.

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10.  Multiple alignment of membrane proteins for measuring residual dipolar couplings using lanthanide ions bound to a small metal chelator.

Authors:  Douglas E Kamen; Sean M Cahill; Mark E Girvin
Journal:  J Am Chem Soc       Date:  2007-01-25       Impact factor: 15.419

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