Literature DB >> 15212500

Measurement of large distances in biomolecules using double-quantum filtered refocused electron spin-echoes.

Peter P Borbat1, Jared H Davis, Samuel E Butcher, Jack H Freed.   

Abstract

It is shown how the new technique of double-quantum filtered refocused electron spin-echoes is a significant improvement over double-quantum coherence ESR, since it increases the experimental acquisition time. This enables the measurement of longer distances in bilabeled biomolecules. The method is demonstrated on a long double-stranded A-type RNA, spin labeled at both ends. The measured distance of 72 A is in excellent agreement with molecular modeling.

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Year:  2004        PMID: 15212500     DOI: 10.1021/ja049372o

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  31 in total

1.  Algorithm for selection of optimized EPR distance restraints for de novo protein structure determination.

Authors:  Kelli Kazmier; Nathan S Alexander; Jens Meiler; Hassane S McHaourab
Journal:  J Struct Biol       Date:  2010-11-11       Impact factor: 2.867

Review 2.  Structural NMR of protein oligomers using hybrid methods.

Authors:  Xu Wang; Hsiau-Wei Lee; Yizhou Liu; James H Prestegard
Journal:  J Struct Biol       Date:  2010-11-11       Impact factor: 2.867

3.  Spin labeling and Double Electron-Electron Resonance (DEER) to Deconstruct Conformational Ensembles of HIV Protease.

Authors:  Thomas M Casey; Gail E Fanucci
Journal:  Methods Enzymol       Date:  2015-09-01       Impact factor: 1.600

4.  Pulsed EPR characterization of HIV-1 protease conformational sampling and inhibitor-induced population shifts.

Authors:  Zhanglong Liu; Thomas M Casey; Mandy E Blackburn; Xi Huang; Linh Pham; Ian Mitchelle S de Vera; Jeffrey D Carter; Jamie L Kear-Scott; Angelo M Veloro; Luis Galiano; Gail E Fanucci
Journal:  Phys Chem Chem Phys       Date:  2016-02-17       Impact factor: 3.676

Review 5.  Site-directed spin labeling studies on nucleic acid structure and dynamics.

Authors:  Glenna Z Sowa; Peter Z Qin
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2008

6.  Scanned-probe detection of electron spin resonance from a nitroxide spin probe.

Authors:  Eric W Moore; SangGap Lee; Steven A Hickman; Sarah J Wright; Lee E Harrell; Peter P Borbat; Jack H Freed; John A Marohn
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

7.  Pulse dipolar ESR of doubly labeled mini TAR DNA and its annealing to mini TAR RNA.

Authors:  Yan Sun; Peter P Borbat; Vladimir M Grigoryants; William K Myers; Jack H Freed; Charles P Scholes
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

8.  The structure of the lipid-embedded potassium channel voltage sensor determined by double-electron-electron resonance spectroscopy.

Authors:  Magdalini Vamvouka; John Cieslak; Ned Van Eps; Wayne Hubbell; Adrian Gross
Journal:  Protein Sci       Date:  2008-03       Impact factor: 6.725

9.  A model system for investigating lineshape/structure correlations in RNA site-directed spin labeling.

Authors:  Peter Z Qin; Jennifer Iseri; Arisa Oki
Journal:  Biochem Biophys Res Commun       Date:  2006-03-03       Impact factor: 3.575

10.  Interaction of radical pairs through-bond and through-space: scope and limitations of the point-dipole approximation in electron paramagnetic resonance spectroscopy.

Authors:  Christoph Riplinger; Joseph P Y Kao; Gerald M Rosen; Velavan Kathirvelu; Gareth R Eaton; Sandra S Eaton; Andrei Kutateladze; Frank Neese
Journal:  J Am Chem Soc       Date:  2009-07-29       Impact factor: 15.419

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