Literature DB >> 15208407

Positioning Arabidopsis in plant biology. A key step toward unification of plant research.

Michael Bevan1, Sean Walsh.   

Abstract

One of the major challenges in biological investigation involves developing a robust predictive framework in which biological outputs can be predicted from input data and knowledge of the state of the system. Currently, genomics-based strategies provide a strong framework for integrating biological knowledge within a species and linking knowledge between diverse organisms, as DNA sequence is a durable, accurate, and complete record of biological information. As such, it provides the best source of information upon which predictive rules can start to be built, tested, and generalized. Generalization is a key component of predictive biology because it defines the extent to which we can accurately predict from one instance to another. In plant science, several important research themes are concerned with generalization, and progress in these areas is reviewed here. The importance of developing a framework for predictive biology that includes a much wider variety of plant species is also emphasized.

Entities:  

Mesh:

Year:  2004        PMID: 15208407      PMCID: PMC514094          DOI: 10.1104/pp.104.043216

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  20 in total

1.  Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.

Authors:  M Ashburner; C A Ball; J A Blake; D Botstein; H Butler; J M Cherry; A P Davis; K Dolinski; S S Dwight; J T Eppig; M A Harris; D P Hill; L Issel-Tarver; A Kasarskis; S Lewis; J C Matese; J E Richardson; M Ringwald; G M Rubin; G Sherlock
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

2.  A transcriptional roadmap to wood formation.

Authors:  M Hertzberg; H Aspeborg; J Schrader; A Andersson; R Erlandsson; K Blomqvist; R Bhalerao; M Uhlén; T T Teeri; J Lundeberg; B Sundberg; P Nilsson; G Sandberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

Review 3.  Genetic control of flowering time in rice, a short-day plant.

Authors:  M Yano; S Kojima; Y Takahashi; H Lin; T Sasaki
Journal:  Plant Physiol       Date:  2001-12       Impact factor: 8.340

Review 4.  Shedding light on the circadian clock and the photoperiodic control of flowering.

Authors:  Ryosuke Hayama; George Coupland
Journal:  Curr Opin Plant Biol       Date:  2003-02       Impact factor: 7.834

Review 5.  Endosperm: the crossroad of seed development.

Authors:  Frédéric Berger
Journal:  Curr Opin Plant Biol       Date:  2003-02       Impact factor: 7.834

6.  Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.

Authors:  K Mayer; C Schüller; R Wambutt; G Murphy; G Volckaert; T Pohl; A Düsterhöft; W Stiekema; K D Entian; N Terryn; B Harris; W Ansorge; P Brandt; L Grivell; M Rieger; M Weichselgartner; V de Simone; B Obermaier; R Mache; M Müller; M Kreis; M Delseny; P Puigdomenech; M Watson; T Schmidtheini; B Reichert; D Portatelle; M Perez-Alonso; M Boutry; I Bancroft; P Vos; J Hoheisel; W Zimmermann; H Wedler; P Ridley; S A Langham; B McCullagh; L Bilham; J Robben; J Van der Schueren; B Grymonprez; Y J Chuang; F Vandenbussche; M Braeken; I Weltjens; M Voet; I Bastiaens; R Aert; E Defoor; T Weitzenegger; G Bothe; U Ramsperger; H Hilbert; M Braun; E Holzer; A Brandt; S Peters; M van Staveren; W Dirske; P Mooijman; R Klein Lankhorst; M Rose; J Hauf; P Kötter; S Berneiser; S Hempel; M Feldpausch; S Lamberth; H Van den Daele; A De Keyser; C Buysshaert; J Gielen; R Villarroel; R De Clercq; M Van Montagu; J Rogers; A Cronin; M Quail; S Bray-Allen; L Clark; J Doggett; S Hall; M Kay; N Lennard; K McLay; R Mayes; A Pettett; M A Rajandream; M Lyne; V Benes; S Rechmann; D Borkova; H Blöcker; M Scharfe; M Grimm; T H Löhnert; S Dose; M de Haan; A Maarse; M Schäfer; S Müller-Auer; C Gabel; M Fuchs; B Fartmann; K Granderath; D Dauner; A Herzl; S Neumann; A Argiriou; D Vitale; R Liguori; E Piravandi; O Massenet; F Quigley; G Clabauld; A Mündlein; R Felber; S Schnabl; R Hiller; W Schmidt; A Lecharny; S Aubourg; F Chefdor; R Cooke; C Berger; A Montfort; E Casacuberta; T Gibbons; N Weber; M Vandenbol; M Bargues; J Terol; A Torres; A Perez-Perez; B Purnelle; E Bent; S Johnson; D Tacon; T Jesse; L Heijnen; S Schwarz; P Scholler; S Heber; P Francs; C Bielke; D Frishman; D Haase; K Lemcke; H W Mewes; S Stocker; P Zaccaria; M Bevan; R K Wilson; M de la Bastide; K Habermann; L Parnell; N Dedhia; L Gnoj; K Schutz; E Huang; L Spiegel; M Sehkon; J Murray; P Sheet; M Cordes; J Abu-Threideh; T Stoneking; J Kalicki; T Graves; G Harmon; J Edwards; P Latreille; L Courtney; J Cloud; A Abbott; K Scott; D Johnson; P Minx; D Bentley; B Fulton; N Miller; T Greco; K Kemp; J Kramer; L Fulton; E Mardis; M Dante; K Pepin; L Hillier; J Nelson; J Spieth; E Ryan; S Andrews; C Geisel; D Layman; H Du; J Ali; A Berghoff; K Jones; K Drone; M Cotton; C Joshu; B Antonoiu; M Zidanic; C Strong; H Sun; B Lamar; C Yordan; P Ma; J Zhong; R Preston; D Vil; M Shekher; A Matero; R Shah; I K Swaby; A O'Shaughnessy; M Rodriguez; J Hoffmann; S Till; S Granat; N Shohdy; A Hasegawa; A Hameed; M Lodhi; A Johnson; E Chen; M Marra; R Martienssen; W R McCombie
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

7.  Positional cloning of the wheat vernalization gene VRN1.

Authors:  L Yan; A Loukoianov; G Tranquilli; M Helguera; T Fahima; J Dubcovsky
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-01       Impact factor: 11.205

8.  Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.

Authors:  Anne-Valérie Gendrel; Zachary Lippman; Cristy Yordan; Vincent Colot; Robert A Martienssen
Journal:  Science       Date:  2002-06-20       Impact factor: 47.728

9.  The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis.

Authors:  Simon Griffiths; Roy P Dunford; George Coupland; David A Laurie
Journal:  Plant Physiol       Date:  2003-04       Impact factor: 8.340

10.  The wheat VRN2 gene is a flowering repressor down-regulated by vernalization.

Authors:  Liuling Yan; Artem Loukoianov; Ann Blechl; Gabriela Tranquilli; Wusirika Ramakrishna; Phillip SanMiguel; Jeffrey L Bennetzen; Viviana Echenique; Jorge Dubcovsky
Journal:  Science       Date:  2004-03-12       Impact factor: 47.728

View more
  2 in total

Review 1.  Prospects and challenges in proteomics.

Authors:  Paul Bertone; Michael Snyder
Journal:  Plant Physiol       Date:  2005-06       Impact factor: 8.340

2.  Repertoires: How to Transform a Project into a Research Community.

Authors:  Sabina Leonelli; Rachel A Ankeny
Journal:  Bioscience       Date:  2015-07-01       Impact factor: 8.589

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.