Literature DB >> 11724959

A transcriptional roadmap to wood formation.

M Hertzberg1, H Aspeborg, J Schrader, A Andersson, R Erlandsson, K Blomqvist, R Bhalerao, M Uhlén, T T Teeri, J Lundeberg, B Sundberg, P Nilsson, G Sandberg.   

Abstract

The large vascular meristem of poplar trees with its highly organized secondary xylem enables the boundaries between different developmental zones to be easily distinguished. This property of wood-forming tissues allowed us to determine a unique tissue-specific transcript profile for a well defined developmental gradient. RNA was prepared from different developmental stages of xylogenesis for DNA microarray analysis by using a hybrid aspen unigene set consisting of 2,995 expressed sequence tags. The analysis revealed that the genes encoding lignin and cellulose biosynthetic enzymes, as well as a number of transcription factors and other potential regulators of xylogenesis, are under strict developmental stage-specific transcriptional regulation.

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Year:  2001        PMID： 11724959      PMCID： PMC64750          DOI： 10.1073/pnas.261293398

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  22 in total

1.  Activation of CDK-activating kinase is dependent on interaction with H-type cyclins in plants.

Authors:  M Yamaguchi; T Fabian; M Sauter; R P Bhalerao; J Schrader; G Sandberg; M Umeda; H Uchimiya
Journal:  Plant J       Date:  2000-10       Impact factor: 6.417

2.  Microarray analysis of Drosophila development during metamorphosis.

Authors:  K P White; S A Rifkin; P Hurban; D S Hogness
Journal:  Science       Date:  1999-12-10       Impact factor: 47.728

3.  Compartmentalized expression of two structurally and functionally distinct 4-coumarate:CoA ligase genes in aspen (Populus tremuloides).

Authors:  W J Hu; A Kawaoka; C J Tsai; J Lung; K Osakabe; H Ebinuma; V L Chiang
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

4.  Quantitative monitoring of gene expression patterns with a complementary DNA microarray.

Authors:  M Schena; D Shalon; R W Davis; P O Brown
Journal:  Science       Date:  1995-10-20       Impact factor: 47.728

5.  The AmMYB308 and AmMYB330 transcription factors from antirrhinum regulate phenylpropanoid and lignin biosynthesis in transgenic tobacco

Authors: 
Journal:  Plant Cell       Date:  1998-02       Impact factor: 11.277

6.  Spatial pattern of cdc2 expression in relation to meristem activity and cell proliferation during plant development.

Authors:  M C Martinez; J E Jørgensen; M A Lawton; C J Lamb; P W Doerner
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

7.  One-step preparation of competent Escherichia coli: transformation and storage of bacterial cells in the same solution.

Authors:  C T Chung; S L Niemela; R H Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

8.  A plasma membrane-bound putative endo-1,4-beta-D-glucanase is required for normal wall assembly and cell elongation in Arabidopsis.

Authors:  F Nicol; I His; A Jauneau; S Vernhettes; H Canut; H Höfte
Journal:  EMBO J       Date:  1998-10-01       Impact factor: 11.598

9.  Orientation of macromolecules in the walls of elongating carrot cells.

Authors:  M C McCann; N J Stacey; R Wilson; K Roberts
Journal:  J Cell Sci       Date:  1993-12       Impact factor: 5.285

10.  The expression of the Athb-8 homeobox gene is restricted to provascular cells in Arabidopsis thaliana.

Authors:  S Baima; F Nobili; G Sessa; S Lucchetti; I Ruberti; G Morelli
Journal:  Development       Date:  1995-12       Impact factor: 6.868
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  128 in total

1.  Genomics and forest biology: Populus emerges as the perennial favorite.

Authors:  Stan D Wullschleger; Stefan Jansson; Gail Taylor
Journal:  Plant Cell       Date:  2002-11       Impact factor: 11.277

2.  Early gene expression associated with the commitment and differentiation of a plant tracheary element is revealed by cDNA-amplified fragment length polymorphism analysis.

Authors:  Dimitra Milioni; Pierre-Etienne Sado; Nicola J Stacey; Keith Roberts; Maureen C McCann
Journal:  Plant Cell       Date:  2002-11       Impact factor: 11.277

3.  Xyloglucan endotransglycosylases have a function during the formation of secondary cell walls of vascular tissues.

Authors:  Veronica Bourquin; Nobuyuki Nishikubo; Hisashi Abe; Harry Brumer; Stuart Denman; Marlin Eklund; Maria Christiernin; Tunla T Teeri; Björn Sundberg; Ewa J Mellerowicz
Journal:  Plant Cell       Date:  2002-12       Impact factor: 11.277

4.  Visualization by comprehensive microarray analysis of gene expression programs during transdifferentiation of mesophyll cells into xylem cells.

Authors:  Taku Demura; Gen Tashiro; Gorou Horiguchi; Naoki Kishimoto; Minoru Kubo; Naoko Matsuoka; Atsushi Minami; Miyo Nagata-Hiwatashi; Keiko Nakamura; Yoshimichi Okamura; Naomi Sassa; Shinsuke Suzuki; Junshi Yazaki; Shoshi Kikuchi; Hiroo Fukuda
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-18       Impact factor: 11.205

5.  Characterization of a PttRPS18 promoter active in the vascular cambium region of hybrid aspen.

Authors:  Ann-Marie Johansson; Chongying Wang; Anneli Stenberg; Magnus Hertzberg; C H Anthony Little; Olof Olsson
Journal:  Plant Mol Biol       Date:  2003-05       Impact factor: 4.076

6.  Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling.

Authors:  Jae-Heung Ko; Kyung-Hwan Han; Sunchung Park; Jaemo Yang
Journal:  Plant Physiol       Date:  2004-06-11       Impact factor: 8.340

Review 7.  Positioning Arabidopsis in plant biology. A key step toward unification of plant research.

Authors:  Michael Bevan; Sean Walsh
Journal:  Plant Physiol       Date:  2004-06       Impact factor: 8.340

Review 8.  A weed for wood? Arabidopsis as a genetic model for xylem development.

Authors:  Kaisa M Nieminen; Leila Kauppinen; Ykä Helariutta
Journal:  Plant Physiol       Date:  2004-06       Impact factor: 8.340

9.  Expansins abundant in secondary xylem belong to subgroup A of the alpha-expansin gene family.

Authors:  Madoka Gray-Mitsumune; Ewa J Mellerowicz; Hisashi Abe; Jarmo Schrader; Anders Winzéll; Fredrik Sterky; Kristina Blomqvist; Simon McQueen-Mason; Tuula T Teeri; Björn Sundberg
Journal:  Plant Physiol       Date:  2004-07-09       Impact factor: 8.340

10.  A Populus EST resource for plant functional genomics.

Authors:  Fredrik Sterky; Rupali R Bhalerao; Per Unneberg; Bo Segerman; Peter Nilsson; Amy M Brunner; Laurence Charbonnel-Campaa; Jenny Jonsson Lindvall; Karolina Tandre; Steven H Strauss; Björn Sundberg; Petter Gustafsson; Mathias Uhlén; Rishikesh P Bhalerao; Ove Nilsson; Göran Sandberg; Jan Karlsson; Joakim Lundeberg; Stefan Jansson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-07       Impact factor: 11.205
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