Literature DB >> 15188257

A high-performance multilane microdevice system designed for the DNA forensics laboratory.

Nils Goedecke1, Brian McKenna, Sameh El-Difrawy, Loucinda Carey, Paul Matsudaira, Daniel Ehrlich.   

Abstract

We report preliminary testing of "GeneTrack", an instrument designed for the specific application of multiplexed short tandem repeat (STR) DNA analysis. The system supports a glass microdevice with 16 lanes of 20 cm effective length and double-T cross injectors. A high-speed galvanometer-scanned four-color detector was specially designed to accommodate the high elution rates on the microdevice. All aspects of the system were carefully matched to practical crime lab requirements for rapid reproducible analysis of crime-scene DNA evidence in conjunction with the United States DNA database (CODIS). Statistically significant studies demonstrate that an absolute, three-sigma, peak accuracy of 0.4-0.9 base pair (bp) can be achieved for the CODIS 13-locus multiplex, utilizing a single channel per sample. Only 0.5 microL of PCR product is needed per lane, a significant reduction in the consumption of costly chemicals in comparison to commercial capillary machines. The instrument is also designed to address problems in temperature-dependent decalibration and environmental sensitivity, which are weaknesses of the commercial capillary machines for the forensics application.

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Year:  2004        PMID: 15188257     DOI: 10.1002/elps.200305897

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  6 in total

1.  Low-volume amplification on chemically structured chips using the PowerPlex16 DNA amplification kit.

Authors:  Ulrike Schmidt; Sabine Lutz-Bonengel; Hans-Joachim Weisser; Timo Sänger; Stefan Pollak; Ulrike Schön; Thomas Zacher; Wolfgang Mann
Journal:  Int J Legal Med       Date:  2005-10-18       Impact factor: 2.686

2.  Branch migration displacement assay with automated heuristic analysis for discrete DNA length measurement using DNA microarrays.

Authors:  Nader Pourmand; Stefano Caramuta; Andrea Villablanca; Silvia Mori; Miloslav Karhanek; Shan X Wang; Ronald W Davis
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-27       Impact factor: 11.205

3.  Lab-on-a-chip technology.

Authors:  Eleanor A M Graham
Journal:  Forensic Sci Med Pathol       Date:  2005-09       Impact factor: 2.007

Review 4.  Parallel imaging microfluidic cytometer.

Authors:  Daniel J Ehrlich; Brian K McKenna; James G Evans; Anna C Belkina; Gerald V Denis; David H Sherr; Man Ching Cheung
Journal:  Methods Cell Biol       Date:  2011       Impact factor: 1.441

5.  Microarray-based STR genotyping using RecA-mediated ligation.

Authors:  David Herrmann; Emily Rose; Uwe Müller; Robert Wagner
Journal:  Nucleic Acids Res       Date:  2010-08-03       Impact factor: 16.971

Review 6.  Electrophoretic separations on microfluidic chips.

Authors:  Dapeng Wu; Jianhua Qin; Bingcheng Lin
Journal:  J Chromatogr A       Date:  2007-12-23       Impact factor: 4.759

  6 in total

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