Literature DB >> 15184480

Sequencing and sequence analysis of VP7 and NSP5 genes reveal emergence of a new genotype of bovine group B rotaviruses in India.

P Barman1, S Ghosh, S Das, V Varghese, S Chaudhuri, S Sarkar, T Krishnan, S K Bhattacharya, A Chakrabarti, N Kobayashi, T N Naik.   

Abstract

Three bovine group B rotavirus strains were detected from diarrheic calves during a surveillance study of rotaviral diarrhea in West Bengal, India. The sequence analysis of VP7 and NSP5 genes of these strains demonstrates a high degree of sequence variation from other group B rotavirus strains, indicating the emergence of a new genotype.

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Year:  2004        PMID： 15184480      PMCID： PMC427839          DOI： 10.1128/JCM.42.6.2816-2818.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  23 in total

1.  cDNA cloning of each genomic segment of the group B rotavirus ADRV: molecular characterization of the 11th RNA segment.

Authors:  G M Chen; T Hung; E R Mackow
Journal:  Virology       Date:  1990-04       Impact factor: 3.616

2.  Rotavirus-like agent in adult non-bacterial diarrhoea in China.

Authors:  T Hung; G M Chen; C G Wang; Z Y Chou; T X Chao; W W Ye; H L Yao; K H Meng
Journal:  Lancet       Date:  1983-11-05       Impact factor: 79.321

3.  Atypical rotaviruses in pigs and cattle.

Authors:  D Chasey; P Davies
Journal:  Vet Rec       Date:  1984-01-07       Impact factor: 2.695

4.  Identification of the gene encoding the group B rotavirus VP7 equivalent: primary characterization of the ADRV segment 9 RNA.

Authors:  G M Chen; T Hung; E R Mackow
Journal:  Virology       Date:  1990-09       Impact factor: 3.616

5.  Molecular characterization of a human rotavirus reveals porcine characteristics in most of the genes including VP6 and NSP4.

Authors:  V Varghese; S Das; Ng B Singh; K Kojima; S K Bhattacharya; T Krishnan; N Kobayashi; T N Naik
Journal:  Arch Virol       Date:  2003-09-22       Impact factor: 2.574

6.  Human group B rotavirus infections cause severe diarrhea in children and adults in Bangladesh.

Authors:  Takeshi Sanekata; Muzahed Uddin Ahmed; Abdul Kader; Koki Taniguchi; Nobumichi Kobayashi
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

7.  Comparison of atypical rotaviruses from calves, piglets, lambs and man.

Authors:  D R Snodgrass; A J Herring; I Campbell; J M Inglis; F D Hargreaves
Journal:  J Gen Virol       Date:  1984-05       Impact factor: 3.891

8.  Comparison of group B rotavirus genes 9 and 11.

Authors:  M Petric; K Mayur; S Vonderfecht; J J Eiden
Journal:  J Gen Virol       Date:  1991-11       Impact factor: 3.891

9.  Detection of rat, porcine, and bovine group B rotavirus in fecal specimens by solid-phase enzyme immunoassay.

Authors:  S L Vonderfecht; D A Lindsay; J J Eiden
Journal:  J Clin Microbiol       Date:  1994-04       Impact factor: 5.948

10.  Rapid diagnosis of rotavirus infection by direct detection of viral nucleic acid in silver-stained polyacrylamide gels.

Authors:  A J Herring; N F Inglis; C K Ojeh; D R Snodgrass; J D Menzies
Journal:  J Clin Microbiol       Date:  1982-09       Impact factor: 5.948
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  10 in total

1.  Epidemiological profile of rotaviral infection in India: challenges for the 21st century.

Authors:  Gagandeep Kang; Shobhana D Kelkar; Shoba D Chitambar; Pratima Ray; Trailokyanath Naik
Journal:  J Infect Dis       Date:  2005-09-01       Impact factor: 5.226

2.  Detection and characterization of bovine coronaviruses in fecal specimens of adult cattle with diarrhea during the warmer seasons.

Authors:  Su-Jin Park; Cheol Jeong; Soon-Seek Yoon; Hyoun E Choy; Linda J Saif; Sung-Hee Park; You-Jung Kim; Jae-Ho Jeong; Sang-Ik Park; Ha-Hyun Kim; Bong-Joo Lee; Ho-Seong Cho; Sang-Ki Kim; Mun-Il Kang; Kyoung-Oh Cho
Journal:  J Clin Microbiol       Date:  2006-09       Impact factor: 5.948

3.  Evidence for interstate transmission and increase in prevalence of bovine group B rotavirus strains with a novel VP7 genotype among diarrhoeic calves in Eastern and Northern states of India.

Authors:  S Ghosh; V Varghese; M Sinha; N Kobayashi; T N Naik
Journal:  Epidemiol Infect       Date:  2007-02-12       Impact factor: 2.451

4.  Multiplexed one-step RT-PCR VP7 and VP4 genotyping assays for rotaviruses using updated primers.

Authors:  Mathew D Esona; Rashi Gautam; Ka Ian Tam; Alice Williams; Slavica Mijatovic-Rustempasic; Michael D Bowen
Journal:  J Virol Methods       Date:  2015-07-29       Impact factor: 2.014

5.  Detection and genotyping of human rotavirus VP4 and VP7 genes by reverse transcriptase PCR and reverse hybridization.

Authors:  Leen-Jan van Doorn; Bernhard Kleter; Evert Hoefnagel; Isabelle Stainier; Annick Poliszczak; Brigitte Colau; Wim Quint
Journal:  J Clin Microbiol       Date:  2009-06-24       Impact factor: 5.948

6.  Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG).

Authors:  Jelle Matthijnssens; Max Ciarlet; Sarah M McDonald; Houssam Attoui; Krisztián Bányai; J Rodney Brister; Javier Buesa; Mathew D Esona; Mary K Estes; Jon R Gentsch; Miren Iturriza-Gómara; Reimar Johne; Carl D Kirkwood; Vito Martella; Peter P C Mertens; Osamu Nakagomi; Viviana Parreño; Mustafizur Rahman; Franco M Ruggeri; Linda J Saif; Norma Santos; Andrej Steyer; Koki Taniguchi; John T Patton; Ulrich Desselberger; Marc Van Ranst
Journal:  Arch Virol       Date:  2011-05-20       Impact factor: 2.574

Review 7.  Porcine Rotaviruses: Epidemiology, Immune Responses and Control Strategies.

Authors:  Anastasia N Vlasova; Joshua O Amimo; Linda J Saif
Journal:  Viruses       Date:  2017-03-18       Impact factor: 5.048

8.  Whole Genome Classification and Phylogenetic Analyses of Rotavirus B strains from the United States.

Authors:  Frances K Shepherd; Diana Maria Herrera-Ibata; Elizabeth Porter; Nitipong Homwong; Richard Hesse; Jianfa Bai; Douglas G Marthaler
Journal:  Pathogens       Date:  2018-04-18

9.  Detection of substantial porcine group B rotavirus genetic diversity in the United States, resulting in a modified classification proposal for G genotypes.

Authors:  Douglas Marthaler; Kurt Rossow; Marie Gramer; James Collins; Sagar Goyal; Hiroshi Tsunemitsu; Kazufumi Kuga; Tohru Suzuki; Max Ciarlet; Jelle Matthijnssens
Journal:  Virology       Date:  2012-08-09       Impact factor: 3.616

10.  Molecular epidemiology of bovine noroviruses in South Korea.

Authors:  Sang-Ik Park; Cheol Jeong; Ha-Hyun Kim; Sung-Hee Park; Su-Jin Park; Bang-Hun Hyun; Dong-Kun Yang; Sang-Ki Kim; Mun-Il Kang; Kyoung-Oh Cho
Journal:  Vet Microbiol       Date:  2007-03-28       Impact factor: 3.293
  10 in total

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