Literature DB >> 15174161

Light-activated transcription and repression by using photocaged SERMs.

Youheng Shi1, John T Koh.   

Abstract

Recently developed methods to regulate the spatial and temporal patterning of genes in a light-directed manner hold promise as powerful tools for exploring the function of genes that act through their unique spatiotemporal patterning. To further explore the application of photocaged ligands of nuclear receptors to control gene expression patterning, the actions of photocaged analogues of selective estrogen-receptor modulators (SERMs) have been evaluated. Photocaged derivatives of hydroxytamoxifen (NB-Htam) and guanidine tamoxifen (NB-Gtam) have been synthesized that selectively antagonize ER alpha- and ER beta-mediated transcription at classic estrogen response elements (EREs) in response to light. When present only intracellularly, Htam and Gtam provide a similar transient repression response. When SERMs are allowed to diffuse out of the cell, transcription is recovered at a similar rate for Htam and Gtam (6.4 and 5.6 h(-1)), but is notably faster than is observed with the covalently binding SERM tamoxifen aziridine (Taz) (3.8 h(-1)). This suggests that the duration of agonist action is controlled by ligand off-rates/diffusion and not by receptor turnover. Gtam activates ER beta-mediated transcription at AP1 sites in a similar way to what has previously been reported for Htam. NB-Gtam and NB-Tam provide a light-activated transcription response at AP1-driven reporters, thus illustrating the unique ability of photocaged SERMs to simultaneously mediate light-activated transcription and repression.

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Year:  2004        PMID: 15174161     DOI: 10.1002/cbic.200300823

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  15 in total

Review 1.  How to control proteins with light in living systems.

Authors:  Arnaud Gautier; Carole Gauron; Michel Volovitch; David Bensimon; Ludovic Jullien; Sophie Vriz
Journal:  Nat Chem Biol       Date:  2014-07       Impact factor: 15.040

2.  Light activated recombination.

Authors:  Kristian H Link; Youheng Shi; John T Koh
Journal:  J Am Chem Soc       Date:  2005-09-28       Impact factor: 15.419

3.  A mutant selective anti-estrogen is a pure antagonist on EREs and AP-1 response elements.

Authors:  Disha Jain; John T Koh
Journal:  Bioorg Med Chem Lett       Date:  2010-07-24       Impact factor: 2.823

Review 4.  Illuminating the chemistry of life: design, synthesis, and applications of "caged" and related photoresponsive compounds.

Authors:  Hsien-Ming Lee; Daniel R Larson; David S Lawrence
Journal:  ACS Chem Biol       Date:  2009-06-19       Impact factor: 5.100

5.  Synthesis of a photocaged tamoxifen for light-dependent activation of Cre-ER recombinase-driven gene modification.

Authors:  Matthew A Inlay; Veronica Choe; Sophia Bharathi; Nathaniel B Fernhoff; James R Baker; Irving L Weissman; Seok Ki Choi
Journal:  Chem Commun (Camb)       Date:  2013-05-28       Impact factor: 6.222

6.  Photomodulating RNA cleavage using photolabile circular antisense oligodeoxynucleotides.

Authors:  XinJing Tang; Meng Su; LiLi Yu; Cong Lv; Jie Wang; ZhongJin Li
Journal:  Nucleic Acids Res       Date:  2010-02-17       Impact factor: 16.971

7.  Optochemogenetics (OCG) allows more precise control of genetic engineering in mice with CreER regulators.

Authors:  Xin Lu; Sarit S Agasti; Claudio Vinegoni; Peter Waterman; Ronald A DePinho; Ralph Weissleder
Journal:  Bioconjug Chem       Date:  2012-08-30       Impact factor: 4.774

8.  Doxycycline-dependent photoactivated gene expression in eukaryotic systems.

Authors:  Sidney B Cambridge; Daniel Geissler; Federico Calegari; Konstantinos Anastassiadis; Mazahir T Hasan; A Francis Stewart; Wieland B Huttner; Volker Hagen; Tobias Bonhoeffer
Journal:  Nat Methods       Date:  2009-06-07       Impact factor: 28.547

9.  Cyanine Photocages Enable Spatial Control of Inducible Cre-Mediated Recombination.

Authors:  Alexander P Gorka; Tsuyoshi Yamamoto; Jianjian Zhu; Martin J Schnermann
Journal:  Chembiochem       Date:  2018-04-16       Impact factor: 3.164

10.  Caged circular antisense oligonucleotides for photomodulation of RNA digestion and gene expression in cells.

Authors:  Li Wu; Yuan Wang; Junzhou Wu; Cong Lv; Jie Wang; Xinjing Tang
Journal:  Nucleic Acids Res       Date:  2012-10-26       Impact factor: 16.971

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